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Name : C730_05135 (C730_05135) Accession : YP_006936516.1 Strain : Helicobacter pylori Rif2 Genome accession: NC_018938 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : - COG ID : - EC number : - Position : 1056175 - 1057242 bp Length : 1068 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGCCACATAACAAACTCACTAAATCTCAGAGAGAACTCTTTTGTAATCTCAAAGCCTTTTTATACACTAAGGCTAAAAA CTTCACGCCCATTCAAGATGTGAAGGATATGGCTTTAATCCTAGACACACAAGATAAAATCTTAAAATGTCATAATATAG AGCAATTAAAACAACTCTGTCATATTCTTTATAATCAAGGCATTAAACACACTATAATGATGCAAGGCTTGTTTTTATTC TTTAACTATTTTAAAGATAATCTCAAATTAAGAAGTTTTAGAATGCTTAGCGAAGAGCAAGTGATTAACTTTCTCTTTGA ACTCGCTCAAAATAGAAAACCCAGCTCTATGGCTAAGTATGTGATGTATTTAAGACAATTCTTTGATTATTTGGATAGAA AAAGGCGTTATAGCTTTGATTTTACGCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC GATAAAGACTTAAAGAGTTTTTTAAAAACACTCTTAGACTATAAGCCAGCTACAAGCTTTGAAAAACGCAATAAGTGTAT TCTACTTATTGTAATACTTGGTGGACTTAGAAAATGCGAAGTGTTAAACATAGAATTAAAACACATTCAAGTAGAAGAGC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGAAAAGAGAGAAAAGCTTATATTAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGAATATAGACTAAAATATTTTAATGGGGCATATCTTTTTAAAAAAGACAAACAAAAAGC ACAAAATTCTTTAACGCTTTATAGCTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGGCATAGTTTTGCAACACTCATTTATCAAGAAACCCAAGACTTAGTTTTAACTTCAAGGGCG TTAGGGCATAGCTCCTTACTCTCTACTAAGATTTATATTCATACTACACAAGAGCATAACAAGAAAGTGGCTCTTGTGTT TGATAGTTTGATAGAGGACAAGAAGTAA Protein sequence : MPHNKLTKSQRELFCNLKAFLYTKAKNFTPIQDVKDMALILDTQDKILKCHNIEQLKQLCHILYNQGIKHTIMMQGLFLF FNYFKDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKRRYSFDFTLKNLAFAKTKESLPRHLN DKDLKSFLKTLLDYKPATSFEKRNKCILLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDEYRLKYFNGAYLFKKDKQKAQNSLTLYSFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIEDKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 7e-101 | 63 |
