Gene Information

Name : C695_03905 (C695_03905)
Accession : YP_006893238.1
Strain : Helicobacter pylori Rif1
Genome accession: NC_018937
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 811437 - 812750 bp
Length : 1314 bp
Strand : +
Note : COG2056 Predicted permease

DNA sequence :
ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT
CAATGTCATGCTTTCTATGATTAGTGCGACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAATG
CAATGATAGACGGCATGAAAGGCAATTTGAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT
AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGTTTAATGGATTACAAGCGATCCACTTTTTGCTTTTTGAT
CGCTTTCATCGCATGCTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC
ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG
CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCACCACCATAGC
GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTCGTTGGACTGCTTGTTGCTGTATTAACGCTATACAAAA
AACCCAGGCACTACAAAGAGAAATCTTTTAATATAGAAAATTACGCCTCGCTTCAATTAAACTACCATGACTACTTGACT
TTTATAGGGATTGTCGTAGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT
CATCTTATTAGGCCGTGGCATTAAGTTTAAAGAAACAGACTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG
CTTTTGTGATGTTGGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGCTTAGTGAATGCGATT
ACAAGCGTAGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC
TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCGTAGAATCTACGA
TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG
CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT
TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA

Protein sequence :
MLENSSIWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA
KSNLIKVALSKLIGLMDYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV
LPVGFGLIFQTTILEQLKANGVSTTIAQITGVMWIAGLAMVVGLLVAVLTLYKKPRHYKEKSFNIENYASLQLNYHDYLT
FIGIVVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI
TSVVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSVESTILLIGIAAALGDAGSPASDSTMGPTCG
LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-52 42
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-52 42
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 1e-52 42
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 1e-52 42