Gene Information

Name : C695_02770 (C695_02770)
Accession : YP_006893025.1
Strain : Helicobacter pylori Rif1
Genome accession: NC_018937
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cag16)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 568730 - 569860 bp
Length : 1131 bp
Strand : +
Note : -

DNA sequence : 
ATGCTTGCAAAAATCGTTTTTAGCTCATTGGTTGCGTTTGGAGTTTTGTCGGCTAATGTGGAGCAGTTTGGTTCATTTTT
CAACGAGATAAAAAAAGAACAAGAAGAAGTGGCTGCAAAAGAAGACGCTCTTAAGGCTCGCAAGAAGCTCTTAAACAATA
CGCATGATTTCTTAGAAGACTTGATTTTTAGAAAACAAAAAATCAAAGAGCTTATGGATCATAGAGCTAAAGTTCTTTCA
GACTTAGAAAACAAATACAAAAAAGAAAAAGAGGCTCTAGAGAAAGAGACAAGAGGTAAAATCCTTACTGCTAAGTCAAA
GGCTTATGGGGATTTGGAGCAAGCCTTAAAAGATAACCCTCTCTATAGGAAACTTCTTCCTAACCCTTATGCCTATGTTT
TAAACCAAGAAACATTCACCAAAGAAGATAGGGAGCGTTTGAGTTATTACTACCCCCAGGTGAAAACGAGCAGTATTTTT
AAAAAAACCACCGCTACCACTAAAGATAAGGCTCAGGCTTTGCTTCAAATGGGTGTGTTTTCTTTAGATGAAGAACAAAA
CAAAAAAGCGAGCCGATTAGCTTTATCTTACAAGCAAGCGATTGAAGAATATTCCAATAACGTTTCTAATTTATTGAGCA
GAAAAGAATTGGATAATATAGATTATTACTTACAGCTTGAAAGAAACAAGTTTGACTCCAAAGCAAAAGATATTGCTCAA
AAGGCTACTAACACGCTTATTTTTAATTCGGAACGCTTGGCGTTTAGCATGGCGATTGATAAGATCAATGAGAAATACTT
AAGGGGCTATGAGGCTTTTTCTAACTTGTTGAAAAATGTCAAAGATGATGTGGAATTGAATACTCTGACTAAAAATTTTA
CCAATCAAAAATTGAGTTTCGCACAAAAACAAAAATTGTGTTTGTTGGTTTTAGACAGCTTCAATTTTGATACCCAATCC
AAAAAATCTATATTAAAAAAGACTAATGAATACAATATTTTCGTAGATAGCGATCCTATGATGAGCGACAAAACCACTAT
GCAAAAAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGGTTTCTGCATACCGAAACAATGTTGCCAAGAATAATC
CCTTTGAATAG

Protein sequence : 
MLAKIVFSSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKARKKLLNNTHDFLEDLIFRKQKIKELMDHRAKVLS
DLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYRKLLPNPYAYVLNQETFTKEDRERLSYYYPQVKTSSIF
KKTTATTKDKAQALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNVSNLLSRKELDNIDYYLQLERNKFDSKAKDIAQ
KATNTLIFNSERLAFSMAIDKINEKYLRGYEAFSNLLKNVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQS
KKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVVSAYRNNVAKNNPFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0537 NP_207333.1 cag pathogenicity island protein (cag16) Virulence cag PAI Protein 1e-152 100
HP0537 BAD14035.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-151 99
cagM AAC44695.1 CagM Virulence cag PAI Protein 9e-152 99
cag16 AAR03960.1 Cag16 Virulence cag PAI Protein 3e-149 99
cagM YP_005779056.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-150 99
cag16 AAR03899.1 Cag16 Virulence cag PAI Protein 9e-152 99
cagM YP_005774534.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
cag16 AAR03929.1 Cag16 Virulence cag PAI Protein 6e-152 99
HP0537 BAD13789.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
cagM YP_003728727.1 cag pathogenicity island protein M Virulence cag PAI Protein 2e-152 99
cag16 AAR03871.1 Cag16 Virulence cag PAI Protein 4e-152 99
cagM AGC69800.1 cag pathogenicity island protein M Virulence cag PAI Protein 1e-152 99
HP0537 BAD13953.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 99
HP0537 BAD13898.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-150 99
HP0537 BAD13980.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-151 99
HP0537 BAD13925.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-149 98
cagM YP_005775737.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-150 98
HP0537 BAD13870.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-150 98
HP0537 BAD13843.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-150 98
cagM NP_223203.1 cag island protein Virulence cag PAI Protein 4e-149 98
cagM YP_005777278.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-149 98
HP0537 BAD14008.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-147 97
HP0537 BAD13816.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-148 97
HP0537 BAD14062.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-141 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
C695_02770 YP_006893025.1 cag pathogenicity island protein (cag16) VFG0296 Protein 4e-153 100