Gene Information

Name : C695_02670 (C695_02670)
Accession : YP_006893005.1
Strain : Helicobacter pylori Rif1
Genome accession: NC_018937
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 546329 - 547159 bp
Length : 831 bp
Strand : -
Note : COG0790 FOG: TPR repeat, SEL1 subfamily

DNA sequence :
ATGTTTAAAGATTTTTATCGCACCACCCTCTCTTTTTTAAAGCCTTTATTGCTTTTACTAGTTTTATTATTGCCGTTTTC
ACTTTGTATAGCTGATGAATATATTAGCATAAGTGATGATTGGGATGAAATTGTGCGAAATCATAAGACATATTATTTTG
AAAATGGTTTAGACCATTTTAATCAAGGCCAATACCAGCAAGCCTTTAAAGATTTTAGATTGGCGCAAGAATACAGCATC
GGGCTTGGCAGTGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGTGGATTACAAAAAAGCACAATTTTA
TGCAGAAAACGCTATCAAAGGGTATGGGAGCGGATTGTTAGGGGGTGCTCTTATTTTAGGACGCATGCAAGCAGAAGGCT
TAGGGATGAAAAAGGATTTGAAACAAGCGCTCAAGACTTATAGGCATGTGGTTCGCATGTTTTCTAATAAAAGCACAAAT
TTTGCTAACAATTTTAGATTACCAAACCTTGCGGAATTTACTAGTATGCTTATTGGATCGCGATTCATTGATCTTTCAGG
TTTGAGCGCGAATCCTATAAAATTTGGAAAGAAATTTGGAATACTTGTTAAGAAATCCACTCAAATCAAAGATAAGACAC
TTCTTTGGGAAGATATTGCTGAAATTTCAAGCAATATTACTTTACTCAAACAACAAATGGGGGAGATCCTTTATAGGATT
GGGATCGCTTATAAAGAAGGGCTTGGCACTAGAAAGAAAAAGGACAGGGCTAAAAAATTCCTGCAAAAATCCGCAGAATT
TGGCTATGAAAAAGCCATGGAAGCTCTGTAG

Protein sequence :
MFKDFYRTTLSFLKPLLLLLVLLLPFSLCIADEYISISDDWDEIVRNHKTYYFENGLDHFNQGQYQQAFKDFRLAQEYSI
GLGSVYLAKMYLEGKGVKVDYKKAQFYAENAIKGYGSGLLGGALILGRMQAEGLGMKKDLKQALKTYRHVVRMFSNKSTN
FANNFRLPNLAEFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQMGEILYRI
GIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPB8_726 YP_003728747.1 chitin synthase regulatory factor 3 Not tested cag PAI Protein 2e-96 91