|
Name : C695_02225 (C695_02225) Accession : YP_006892925.1 Strain : Helicobacter pylori Rif1 Genome accession: NC_018937 Putative virulence/resistance : Unknown Product : IS605 transposase (tnpB) Function : - COG functional category : - COG ID : - EC number : - Position : 454831 - 456114 bp Length : 1284 bp Strand : + Note : COG0675 Transposase and inactivated derivatives DNA sequence : TTGCTTAACGCTATCAAGTTTAGAATTTATCCTAACGCCCAACAAAAAGAATTGATTTCTAAACATTTTGGCTGTTCTAG AGTCGTGTATAACTACTTTTTAGATTACCGGCAAAAGCAATACGCAAAAGGCATTAAAGAAACTTACTTCACCATGCAAA AAGTCTTAACCCAAATCAAGCGGCAAGAAAAATACCATTACCTCAATGAATGCAATTCTCAAAGCTTGCAAATGGCGTTA AGACAGCTGGTGAGCGCTTATGATAATTTCTTTAGCAAAAGAGCGAGATACCCTAAATTCAAATCCAAGAAAAACGCTAA ACAATCTTTTGCAATCCCTCAAAACATAGAAACCAAAACAGAAACTCAAACCATCGCTCTCCCTAAATTCAAAGAGGGCA TTAAGGCTAAATTACACAGAGATTTGCCTAAAGATAGCGTTATCAAACAGGCTTTTATTTCTTGCATAGCGGATCAATAT TTTTGTTCTCTATCCTATGAAACCAAAGAGCCTATCCCTAAACCCACCATTATCAAAAAAGCGGTAGGTTTAGACATGGG CTTAAGAACGCTCATTGTTACAAGCGATAAAATAGGATACCCACACATTCGTTTTTATCAAAAACTAGAAAAGAAACTCA CTAAAGCGCAAAGGAGGTTAAGTAAAAAAGTAAAAGATTCCAACAACAGGAAAAAACAAGCTAAAAAGGTATCCAGATTG CATTTAGCTTGTTCAAACACTAGAGATGACTACTTGCATAAAATCAGTAATGAGATAACCAATCAATACGATCTGATAGG AGTAGAAACCTTGAATGTTAAAGCTCTTATGAGAACCTATCATTCTAAAAGCCTTGCTAATGCGAGTTGGGGGAAATTTC TTACTATGCTAGAGTATAAAGCCCAAAGAAAAGGCAAAACCCTCTTATCCATAGACAGATTTTTCCCTAGCTCTCAATTG TGTTCTTATTGTGGGGTCAATACAGGCAAAAAACATGAAAGCATCACTAAATTCACTTGTCCTCATTGTCAAACCACACA CCACAGAGATTATAATGCGAGCGTCAATATCAGAAACTACGCTTTAGGCATGCTAGATGATAGGCATAAAGTAAAGACAG ATAAAGCTAGGGTAGGGATTATCCGAAGCGATTACACTCATCACACTAATGAGTGTGTCAAAGCTTGTGGAGCTTCCTCT AACGGGGTTAGTTCTAAATATGGAAACATATTGGATCTAGCTAGTTATGGAGCTATGAAGCAAGAAAAAGCCCAATCGCT TTAG Protein sequence : MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMAL RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIETKTETQTIALPKFKEGIKAKLHRDLPKDSVIKQAFISCIADQY FCSLSYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIGYPHIRFYQKLEKKLTKAQRRLSKKVKDSNNRKKQAKKVSRL HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKALMRTYHSKSLANASWGKFLTMLEYKAQRKGKTLLSIDRFFPSSQL CSYCGVNTGKKHESITKFTCPHCQTTHHRDYNASVNIRNYALGMLDDRHKVKTDKARVGIIRSDYTHHTNECVKACGASS NGVSSKYGNILDLASYGAMKQEKAQSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAF80205.1 | TnpB | Not tested | cag PAI | Protein | 0.0 | 95 |
| tnpB | AAC44710.2 | TnpB | Not tested | cag PAI | Protein | 0.0 | 95 |
