|
Name : copB (LMOSLCC2482_p0025) Accession : YP_006950397.1 Strain : Genome accession: NC_018888 Putative virulence/resistance : Resistance Product : copper-translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.4 Position : 20408 - 22504 bp Length : 2097 bp Strand : + Note : - DNA sequence : TTGTCGAATAACAAAAAACACCAAAATCATGAGCATCATAGTCATCAAGAACATGAAAATCACACTAGTCATGGTAATCA TGAGCATCATAGTCATCAAGAACATGAAAATCACACTAGTCATGGTAATCATGAACATCACCATCATGGAAATTTTAAAA GTAAATTCTTTATTTCTTTGATTTTTGCGATACCGATTATTATTTTATCGCCCATGATGGGAGTTAAATTACCGTTTCAA ATTTCATTTACAGGGTCAGATTGGATTGTATTAATTCTTGCTACAATTTTATTCTTTTACGGAGGAAAGCCATTTTTATC AGGGGCTAAAGATGAAATTTCAACTAAAAAACCTGGAATGATGACGCTTGTTGCTCTAGGTATTTCAGTAGCTTATATTT ATAGTTTATACGCCTTTTATATGAATAACTTCAGTGGTTCATCCACACATACAATGGACTTTTTCTGGGAATTAGCGACT TTAATTTTAATCATGTTATTAGGTCATTGGATTGAAATGAACGCAGTAGGTAATGCAGGCAATGCACTGAAGAAAATGGC AGAACTTTTACCTAATACTGCAGTGAAGCTGATTGATAACAATCAACGAGAAGAAGTTAAAATATCAGATATTCATATTG ACGATATTGTGGAAGTCAGAGCAGGCGAAAGTATACCCACAGACGGAATCATTGTTCAAGGAGAAACATCAATTGACGAA TCATTAGTTACTGGCGAATCAAAAAAAGTTCATAAAACTCATAATGATGATGTTATTGGAGGTTCAATTAATGGTTCAGG TACAGTACAAGTTAAAGTGACTGCTACGGGTGAAAATGGCTACCTATCTCAAGTTATGGGTCTTGTTAACCAAGCTCAAA ACGATAAGTCAAAAGCTGAACTCCTCTCTGATAAAGTCGCAGGTTATTTGTTTTACTTTGCAGTAAGTATTGGCCTGATT TCATTTATTGTATGGATGCTTATTCAAAACAACGTCGATTTCGCACTTGAACGGCTAGTAACCGTATTAGTCATTGCTTG TCCACATGCATTAGGCTTGGCAATACCTTTAGTTACAGCACGTTCTACCTCTATAGGCGCACATAATGGTTTAATCATTA AAAACAGAGAATCTGTAGAAATCGCACAACACATTGATTACATCATGATGGATAAAACTGGGACACTAACTGAAGGTAAC TTTTCAGTGAATCACTATGAAAGTTTTACAGACGAGTTAAATAATGAAGAAATATTGAGTCTATTTGCTTCATTAGAAAG TAATTCTAATCATCCACTTGCCACTGGTATTGTTGATTTTGCTAAAGGCAAAAATATTTCATATGCTACTCCTCAAGAAG TTAATAATATTCCAGGTGTAGGCTTAGAAGGCACAGTTGATAATAAAAAACTCAAAATAGTGAATGTTTCTTATCTCGAT AAAAGCAATTTTGATTATAATAAAGAACAATTTACGAATCTCGCTCAACAAGGGAATTCTATTAGTTATCTAATTCATGA CCGACAAGTTATTGGTATTATCGCACAAGGCGATAAAATTAAAGAAAGTTCAAAACAAATGGTTTCGGATTTATTATCGA GAAACATTACGCCAGTCATGCTTACAGGCGATAATAAAGAAGTGGCACAAACAGTGGCTGAAGAATTAGGTATTAGTGAT GTCCACGCGCAATTGATGCCCGAAGATAAAGAAAGTATTATCCAAGATTATCAAAGCAATGGTAGCAAAATCATGATGGT TGGTGATGGTATCAATGATGCGCCAAGCCTTATTAGAGCAGATATTGGTATGGCAATTGGCGCAGGGACAGATGTAGCTA TTGAATCGGGGGATGTCATACTCGTTAAAAGTAATCCTTCTGATATTATCAATTTTTTGTCCCTTTCAAAAAATACGATG AAAAAAATGGTTCAAAATTTATGGTGGGGCGCAGGATATAACGTGATTGCAGTTCCTCTTGCAGCTGGTATATTAGCTTC TATTGGTTTAATATTATCACCTGCTGTGGGTGCAATACTTATGTCTTTAAGTACGATCATCGTAGCAATTAATGCATTTA CATTAAAATTAAAATAA Protein sequence : MSNNKKHQNHEHHSHQEHENHTSHGNHEHHSHQEHENHTSHGNHEHHHHGNFKSKFFISLIFAIPIIILSPMMGVKLPFQ ISFTGSDWIVLILATILFFYGGKPFLSGAKDEISTKKPGMMTLVALGISVAYIYSLYAFYMNNFSGSSTHTMDFFWELAT LILIMLLGHWIEMNAVGNAGNALKKMAELLPNTAVKLIDNNQREEVKISDIHIDDIVEVRAGESIPTDGIIVQGETSIDE SLVTGESKKVHKTHNDDVIGGSINGSGTVQVKVTATGENGYLSQVMGLVNQAQNDKSKAELLSDKVAGYLFYFAVSIGLI SFIVWMLIQNNVDFALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYIMMDKTGTLTEGN FSVNHYESFTDELNNEEILSLFASLESNSNHPLATGIVDFAKGKNISYATPQEVNNIPGVGLEGTVDNKKLKIVNVSYLD KSNFDYNKEQFTNLAQQGNSISYLIHDRQVIGIIAQGDKIKESSKQMVSDLLSRNITPVMLTGDNKEVAQTVAEELGISD VHAQLMPEDKESIIQDYQSNGSKIMMVGDGINDAPSLIRADIGMAIGAGTDVAIESGDVILVKSNPSDIINFLSLSKNTM KKMVQNLWWGAGYNVIAVPLAAGILASIGLILSPAVGAILMSLSTIIVAINAFTLKLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 85 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_006950397.1 | copper-translocating P-type ATPase | BAC0079 | Protein | 0.0 | 59 |
| copB | YP_006950397.1 | copper-translocating P-type ATPase | BAC0383 | Protein | 2e-146 | 49 |
| copB | YP_006950397.1 | copper-translocating P-type ATPase | BAC0629 | Protein | 2e-126 | 46 |
