Gene Information

Name : ciaR (BTB_c05860)
Accession : YP_006925241.1
Strain : Bacillus thuringiensis Bt407
Genome accession: NC_018877
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein CiaR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 571972 - 572643 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTTTACTTGTAGTAGAAGATAATGCTTCGTTATTAGAGTCTATCGTACAAATTTTGCGTGATGAATTTGAAGTAGA
TACGGCAATAAATGGAGAAGATGGATTGTTTTTAGCTCTTCAAAATATATATGATGCAATTTTGCTGGATGTGATGATGC
CAGGGATGGACGGATTTGAAGTGATTCAAAAAATACGTGATGAAAAGATTGAAACACCAGTCCTGTTTTTGACAGCGAGA
GATTCTTTAGAAGATCGGGTGAAGGGATTGGACTTTGGTGGAGATGACTATATCGTTAAGCCATTTCAGGCCCCTGAATT
AAAAGCGAGAATTCGCGCTTTACTACGCAGAAGTGGTAGTTTAACAACGCAGCAAACGATTCGTTATAGAGGGATTGAAT
TGTTCGGAAAAGATAAAGATGTTCAAGTAGATGGACAAGGTATTAAGCTGACATTGAAACAATATGAGCTACTAGAGTAT
CTCATTCAAAATAGCGGGAAGATTTTAATGCGTGAACAAATTTTTGATCGTGTTTGGGGATTTGATTCAGATACGACAGT
AGCGATTGTAGAAGTGTATGTGCATCATTTACGTAAAAAATTAGAGCCATCCGGTTATCAGAAAGATATTCAAACCGTTC
GAGGTATTGGATATATATTAAAAGAACAATGA

Protein sequence : 
MRLLVVEDNASLLESIVQILRDEFEVDTAINGEDGLFLALQNIYDAILLDVMMPGMDGFEVIQKIRDEKIETPVLFLTAR
DSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSLTTQQTIRYRGIELFGKDKDVQVDGQGIKLTLKQYELLEY
LIQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPSGYQKDIQTVRGIGYILKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-35 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-35 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciaR YP_006925241.1 transcriptional regulatory protein CiaR BAC0125 Protein 2e-36 45
ciaR YP_006925241.1 transcriptional regulatory protein CiaR BAC0638 Protein 6e-35 44
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_013450.8614146.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR AE015929.1.gene1106. Protein 1e-34 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_002951.3238224.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_007793.3914065.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_002758.1121390.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_010079.5776364.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_002952.2859858.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_007622.3794948.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR NC_003923.1003417.p0 Protein 3e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR HE999704.1.gene1528. Protein 5e-36 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR BAC0308 Protein 2e-33 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR BAC0083 Protein 2e-40 42
ciaR YP_006925241.1 transcriptional regulatory protein CiaR BAC0197 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ciaR YP_006925241.1 transcriptional regulatory protein CiaR VFG0596 Protein 5e-36 43
ciaR YP_006925241.1 transcriptional regulatory protein CiaR VFG1390 Protein 2e-39 43
ciaR YP_006925241.1 transcriptional regulatory protein CiaR VFG1386 Protein 1e-42 43
ciaR YP_006925241.1 transcriptional regulatory protein CiaR VFG1389 Protein 1e-37 41