Gene Information

Name : yfmF1 (BTB_c45070)
Accession : YP_006929125.1
Strain : Bacillus thuringiensis Bt407
Genome accession: NC_018877
Putative virulence/resistance : Virulence
Product : Fe(3+)-citrate import ATP-binding protein YfmF
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 4362873 - 4363691 bp
Length : 819 bp
Strand : -
Note : -

DNA sequence :

GTGATTTCCGTTAACAAAGTGTTTTATGCACACTCTGAAAGATTTCAAATGCAAAATATGAATGTACATATTAAGGCTGG
AGAAATCGTTAGTTTAATTGGTCCGAATGGATCGGGAAAATCTACTTTGCTTCGTTTAATAGCAAGGCTACTGAAACAAA
GCGAAGGGGACATCATTTTAGATGGGAAAAATATTCATATGATGAAGAGTGCTGATGTAGCGAAGCAATTAGCGATGTTA
CCACAAATGCATGATCATCAATTAGATTTGACAGTGAAAGAACTAATTGAGTTCGGAAGAGGTCCACATAAATCATGGAG
TAGCCGCTTAAATAAAGAAGATGAAGAAATTGTTGATTGGGCATTGTCTGTTACAAATCTTGAAGGGTATGAATATCGTC
TTTTACATTCTTTATCAGGAGGGGAACGGCAACGTGCTTGGATTGCGATGACGCTAGCGCAACGTACAAATGTCTTATTA
TTGGATGAACCAACAACCTTTTTAGATATCGTTCACCAGTTGGAAGTAATGGAACTTGTGAAACGATTAAATGAGGAGTT
TGGAATGACAATTATAATGGTTTTACATGACATTAACCAAGCTGCTCAATATAGCGATCGTTTACTTGTATTAAAGCGAG
GAAAGATTCAGTATGATGGTATACCAGAAGAAGTACTATGCCATGAAATGTTTCAACATGTATTTGGCATAGATGTAGAT
ATTTTTCAAGGAAATGACAAACCGTTTTTTACACCGAAACGAATTTCTAGAAGGGGAGAAGAGCGATGCAAACAGAAGAG
CGTATTACCACTGAATTAG

Protein sequence :

MISVNKVFYAHSERFQMQNMNVHIKAGEIVSLIGPNGSGKSTLLRLIARLLKQSEGDIILDGKNIHMMKSADVAKQLAML
PQMHDHQLDLTVKELIEFGRGPHKSWSSRLNKEDEEIVDWALSVTNLEGYEYRLLHSLSGGERQRAWIAMTLAQRTNVLL
LDEPTTFLDIVHQLEVMELVKRLNEEFGMTIIMVLHDINQAAQYSDRLLVLKRGKIQYDGIPEEVLCHEMFQHVFGIDVD
IFQGNDKPFFTPKRISRRGEERCKQKSVLPLN

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-42	45
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	1e-42	45
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	1e-42	45
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	1e-42	45
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	7e-41	44
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	7e-41	44
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	7e-41	44
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	7e-41	44
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	2e-41	43
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	9e-40	43
CDCE8392_1767	YP_005134301.1	iron complex transport system ATP-binding protein	Virulence	Not named	Protein	7e-40	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
yfmF1	YP_006929125.1	Fe(3+)-citrate import ATP-binding protein YfmF	BAC0164	Protein	1e-41	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
yfmF1	YP_006929125.1	Fe(3+)-citrate import ATP-binding protein YfmF	VFG1042	Protein	1e-41	43
yfmF1	YP_006929125.1	Fe(3+)-citrate import ATP-binding protein YfmF	VFG0925	Protein	2e-40	43