Gene Information

Name : Mpsy_0543 (Mpsy_0543)
Accession : YP_006922122.1
Strain : Methanolobus psychrophilus R15
Genome accession: NC_018876
Putative virulence/resistance : Virulence
Product : UDP-glucose 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 533235 - 534179 bp
Length : 945 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAGACAAGAAAGTGATTGTTACTGGTGGGATGGGATTCATCGGATCTCATCTTACTGAAAAGCTACTTGAGAACAA
TGAAGTTACGGTCATTGATAATGAAGCTACAGGTAAGATAGATAACATCAAACACCTGTTGGAAAACAAGAACCTCACCA
TAGTCCATGAAAGCATCATAGAACTTGATCTTCATGAAATATTCAAAGGAAAAGACTATGTGTTCCATCTGGCAGCCATC
CCCAGTGTCCCAAGAAGCGTAAAAGACCCCTTCGCCTCAAACGAAGCAAACGTCACCGGGACCCTGAAAGTCCTGATTGC
AGCAAAAGACAGCGGCGTAAAGAAGGTTATATTTTCATCTTCATCTTCGGTCTATGGTGATACTCCCACTCTTCTCAAAA
GAGAAGACATGCCAGTAAACCCACAATCTCCCTACGCCATCACAAAAGCCACCGGAGAAATGTACTGCAGGGTCTTCCAA
GAACTTTACGGACTTCCAACCATTTGTTTACGGTATTTCAATGTATTTGGACCTAGACAAGACCCTAATTCCCAATATGC
TGCAGTCATACCTAAATTTATAACCGGAATCATGAATGATGAAAGCCCAGTAATATATGGAGATGGAGAACAAAGCAGGG
ACTTCACTTATGTAAAACATGTGGTTGTTGCAAATATATTGTCATGTGAATCTAATGAGACAGGTATTTTTAATATTGCA
TGTAGTAGAAGAATTACAATCAATGAACTTGTTGCTTACATCAATGAGATATTGGGTAAGGATATAATAACTGAAAATAT
TGACTCAAGGCCAGGGGATATAAAACATTCGTTGGCGGATATATCCAGAGCTGGGAAATTTGGGTATAATCCTGTGGGTG
ATTTTAGAGATGAATTGAAAAAGGTAATTCAATGGTTTGAGAATAAAAGAAACAATGCTGTCTAA

Protein sequence : 
MKDKKVIVTGGMGFIGSHLTEKLLENNEVTVIDNEATGKIDNIKHLLENKNLTIVHESIIELDLHEIFKGKDYVFHLAAI
PSVPRSVKDPFASNEANVTGTLKVLIAAKDSGVKKVIFSSSSSVYGDTPTLLKREDMPVNPQSPYAITKATGEMYCRVFQ
ELYGLPTICLRYFNVFGPRQDPNSQYAAVIPKFITGIMNDESPVIYGDGEQSRDFTYVKHVVVANILSCESNETGIFNIA
CSRRITINELVAYINEILGKDIITENIDSRPGDIKHSLADISRAGKFGYNPVGDFRDELKKVIQWFENKRNNAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-44 41
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-44 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mpsy_0543 YP_006922122.1 UDP-glucose 4-epimerase VFG0430 Protein 1e-44 41