Gene Information

Name : glnA1 (Tph_c08620)
Accession : YP_006919591.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.3.1.2
Position : 894094 - 895509 bp
Length : 1416 bp
Strand : -
Note : -

DNA sequence :
ATGAAACCGGAGGAAGTAGTAGCCTTAGTGAAGGAAAAAGGAATTCAGTTCATCGATATGAAATTCAACGACTTACCCGG
CCTCTGGCAGCATTTCACGATTCCCGCCGGGGAACTGACGGATGAGGTCTTCAGAGAAGGGCTGGGTTTTGACGGCTCCA
GTATTCGGGGCTTTCAAGAGATCCAGGAAAGCGACATGATCCTGATTCCGGACCCCGACACTGCAATCGTCGATCCAATC
TGCAGTGTTCCCACCCTGTCTCTGATCTGTGACATCTACGACCCGATCACAAAAGAACCCTATACCAGGGATCCCCGCTT
TGTAGCGAAAAAGGCCGAGTCCTACCTCAAGGAGTCGGGCATCGCCGATACCAGCTACTGGGGCCCGGAAATGGAATTTT
TCATTTTCGACGACGTGCGCTTTGACCAGACTGTGCATTGCGGATACTATTTCGTCGACTCCATCGAAGGGGAATGGAAC
ACAGGGCGCGAAGAAAAGCCGAACCTCGGCTACAAACCTCGCTATAAGGAAGGTTATTTTCCGGTTCCTCCCCACGATTC
CTTGCATGACCTGCGCAGCGAAATCGTCCTTGCCATGCTCGAAATCGGGAACGGCATTGAAGTACACCACCATGAGGTGG
CCAGCGGGGGACAAGGGGAAATCGATATGAAGTTCGATACTCTGACCAAAATGGCCGATAAATGCATGAAATACAAGTAT
ATTGTCAAGAATATCGCCAGACGCCACAACAAAGTAGCCACATTTATGCCCAAACCGCTTTTCCAGGACAACGGTTCGGG
AATGCACACCCATCAGTCCCTTTGGAAAGATGGGACCAACCTTTTCTTTGACCCCGACGGCTATGCTCAAATCAGTCAAA
CCGCCAAGTATTACATCGGCGGACTGCTCGAGCACGCCCCGGCACTGATGGCCTTCTGCGCCCCCACAACCAACTCCTAC
AAAAGACTGGTTCCCGGATTCGAAGCCCCAGTCAATCTGACTTACTCTTCACGGAACAGAAGCGCCGCCATCCGGATTCC
GATGTACTCAAACAACCCTAAAAGCAAACGCATCGAATTTCGCCCTCCCGACTGTACCTGCAACCCCTATCTGGCCTTCG
CCGCCATGCTGATGGCGGGTCTCGACGGGATTGAAAGGGAGATCGACCCCGGTGAACCGATAGAAAAAAACATCTATAAA
CTGGAGGGACCGGAGGCGCATAAAGTCAAAACAGTGCCAGGGTCGCTGGAAGAAGCGCTTATCGCCCTGGAGCAGGACCA
TGACTTCCTGCTGAAAGGAAACGTCTTTACTGCGGACCTGCTCGACGTCTGGATCAGGTACAAACGAGAACGGGAGATCG
ATGCCATCAAGCTGCGCCCTCATCCATACGAATTCCACCTCTATTTTGACCTTTAA

Protein sequence :
MKPEEVVALVKEKGIQFIDMKFNDLPGLWQHFTIPAGELTDEVFREGLGFDGSSIRGFQEIQESDMILIPDPDTAIVDPI
CSVPTLSLICDIYDPITKEPYTRDPRFVAKKAESYLKESGIADTSYWGPEMEFFIFDDVRFDQTVHCGYYFVDSIEGEWN
TGREEKPNLGYKPRYKEGYFPVPPHDSLHDLRSEIVLAMLEIGNGIEVHHHEVASGGQGEIDMKFDTLTKMADKCMKYKY
IVKNIARRHNKVATFMPKPLFQDNGSGMHTHQSLWKDGTNLFFDPDGYAQISQTAKYYIGGLLEHAPALMAFCAPTTNSY
KRLVPGFEAPVNLTYSSRNRSAAIRIPMYSNNPKSKRIEFRPPDCTCNPYLAFAAMLMAGLDGIEREIDPGEPIEKNIYK
LEGPEAHKVKTVPGSLEEALIALEQDHDFLLKGNVFTADLLDVWIRYKREREIDAIKLRPHPYEFHLYFDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-94 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA1 YP_006919591.1 glutamine synthetase VFG1399 Protein 2e-132 55