Gene Information

Name : phoP (Tph_c04840)
Accession : YP_006919225.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Resistance
Product : alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 503927 - 504619 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence :
ATGCCTCCCAGGATCCTTGTGGTTGATGACGAGGATGTGATTGTGAAACTTGTTTCCTATAATTTAAAGAAAGAGGGTTT
TGAAGTCATTACTGCCGGTGACGGGCAGGAAGCCTGGGAAAAGATCCGCCAGGAAAAACCAGATCTGGTCATCCTCGATG
TCATGCTCCCGGGGATGGATGGCTTTTCTCTGTGCCGCCTGCTGCGCCAGGAAAAGATGATGACCCCGGTTCTGATGCTG
ACGGCTAAGGATGAGGAGATCGACAGGGTACTCGGTCTGGAGATAGGGGCGGATGATTACCTGACCAAGCCCTTCAGCCC
GCGGGAGCTGATTGCCAGGGTGAGGGCGATCCTGCGCCGCACCGGGGAACGGAGGACGGGCCAGGAGGAGCAGCTGGAAT
TTGGAGAACTGGTGGTTTATCCTGCCAGGTATGAGGTCCGGCGGGGCGGAGAGCAGATCGAACTCACACCCAGGGAATTT
GAGCTGCTGTTGCTGCTGTTGCGGAATGCCGGCCTTGTCATGAGCAGGGAATACATCCTGCAAAAACTCTGGGGGGATGA
TTTTTACGGTGATGACCGGGTGGTTGACGTTCATATCAGGCACCTGCGGGAGAAGATCGAGAGAGAGCCGGGTAATCCCG
TCTACATAAAAACAGTGCGGGGGGTGGGTTACAAGTTCCAACCGCCAGAATGA

Protein sequence :
MPPRILVVDDEDVIVKLVSYNLKKEGFEVITAGDGQEAWEKIRQEKPDLVILDVMLPGMDGFSLCRLLRQEKMMTPVLML
TAKDEEIDRVLGLEIGADDYLTKPFSPRELIARVRAILRRTGERRTGQEEQLEFGELVVYPARYEVRRGGEQIELTPREF
ELLLLLLRNAGLVMSREYILQKLWGDDFYGDDRVVDVHIRHLREKIEREPGNPVYIKTVRGVGYKFQPPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-28 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-26 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-25 42
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 9e-29 41
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-32 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859905.p0 Protein 6e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003749.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794472.p0 Protein 5e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002745.1124361.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009782.5559369.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3237708.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121668.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_009641.5332272.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614421.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914279.p0 Protein 7e-52 54
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP HE999704.1.gene2815. Protein 2e-49 53
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE016830.1.gene1681. Protein 1e-48 50
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7686381. Protein 4e-46 49
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_012469.1.7685629. Protein 2e-45 49
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF155139.2.orf0.gene Protein 1e-38 48
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001918.1.gene5135. Protein 8e-24 46
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE000516.2.gene3505. Protein 4e-42 46
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP FJ349556.1.orf0.gene Protein 3e-37 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002695.1.915041.p Protein 3e-27 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000647.1.gene4257. Protein 2e-26 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001138.1.gene4273. Protein 1e-26 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000034.1.gene3834. Protein 3e-27 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0533 Protein 2e-26 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_011595.7057856.p0 Protein 1e-29 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010410.6002989.p0 Protein 1e-29 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010400.5986590.p0 Protein 6e-30 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_014475.1.orf0.gen Protein 5e-37 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0125 Protein 5e-28 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_005054.2598277.p0 Protein 5e-37 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000675.2.gene1535. Protein 2e-33 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP HE999704.1.gene1528. Protein 2e-30 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AF162694.1.orf4.gene Protein 4e-28 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP EU250284.1.orf4.gene Protein 2e-30 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0197 Protein 4e-26 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP004022.1.gene3215. Protein 1e-28 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001485.1.gene721.p Protein 5e-31 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001918.1.gene3444. Protein 2e-33 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP001138.1.gene2239. Protein 2e-33 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000034.1.gene2186. Protein 4e-34 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002695.1.916589.p Protein 3e-34 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0596 Protein 2e-33 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0039 Protein 4e-34 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP CP000647.1.gene2531. Protein 3e-32 43
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP U35369.1.gene1.p01 Protein 8e-29 42
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE016830.1.gene2255. Protein 8e-29 42
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_003923.1003417.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_013450.8614146.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002951.3238224.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007793.3914065.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002758.1121390.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_010079.5776364.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_002952.2859858.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AE015929.1.gene1106. Protein 3e-26 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP NC_007622.3794948.p0 Protein 2e-29 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0308 Protein 5e-27 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP AM180355.1.gene1830. Protein 3e-32 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP BAC0083 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1389 Protein 4e-27 46
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1386 Protein 7e-36 45
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1390 Protein 8e-33 44
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG0596 Protein 7e-27 42
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1563 Protein 1e-32 41
phoP YP_006919225.1 alkaline phosphatase synthesis transcriptional regulatory protein PhoP VFG1702 Protein 9e-33 41