Gene Information

Name : tnp1 (Tph_c03340)
Accession : YP_006919080.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Unknown
Product : transposase Tnp
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 335409 - 336641 bp
Length : 1233 bp
Strand : +
Note : -

DNA sequence :
ATGGCTCACTACCAGGTTACCGTAGACTGTGATCTCTTGCAAGGATTATTTATTCGGGATGATGGATTGGCTCGGTTGGT
GGAGAACATCGTGAATCAGATACTCGATGCTCAGGCTACCGAACAACTCAGGGCCAAGCCATACGAACGTACCGAAGAGC
GGCAGGGGTACCGCAACGGGTATCGGGATAAGCTGCTCAAGTCTCGCGTAGGAGAACTTACGCTTATGGTTCCCCGTCTC
CGGAGCGGGCACTTCTCCACGGAGCTTTTCGAGCGGTACCAGCGGAGCGAGCAGGCGCTCTTGCTGGCCATGGTCGAGAT
GGTCGTGAACGGCGTATCCACCAGGAAGGTAAGGGCGGTTGTTGATGAACTATGCGGCACGGAGTTCTCCAAATCCACCG
TATCCAGCCTGTGCAAAAGACTGGACGACATCGTAAAGGAGTGGAACGAGCGAGATTTGAGCAGCCAGGAATACCCATTT
CTCCTGGTAGATGCCATTGTCATCCGGGTGCGTAAAGGCGGCCGGGTACGGCTTTCAAGCGTACTTCTCGCTACAGGGAT
CAACCGGGAGGGATACCGGGAGATTTTAGGGCTTATGCTCGGGGATAGCGAATCAGAGGCTGCTTGGTCGGAGTTCTTCG
GCCGGCTCAAGGAGCGCGGTCTCAAGGGAGTGGACTTGGTTGTTTCGGATGATCACAAGGGCTTGATCAATGCGATAGAA
ACCCACTTCCAAGGAGCGACATGGCAGCGGTGCCAGACCCACTTTATCCGGAACATCCTGGACGCCTGTCCTAAGAGCCT
CCAGGGCGACCTGCACGGGCGACTGCGGTTGATCTTCGACGCGCCGGATATGGAGACGGCCAGGCGGTTGCTGAACGAAA
CGATAGAGGCCTTTGGCGCCCGGGCGCCAAAGGCGGTAGAGCGACTTGAAGCTGGTTTCGAGGACGCAATGGCGGTGATG
GCACTACCAGGGCGCTACCGGAAGCGGCTGCGCACCACCAATGGAGTCGAGCGGCTCAACCAGGAGATCCGCCGGCGGGA
GCGGGTGATCCGAATCTTCCCTAACGAGGAGTCGGCTGTGAGACTGATCGGAGCAGTGCTTGTAGAGATCGACGAGGTGT
GGACCACAGGAAAGCGCTACTTTGATATGGCAGAGTATTGGGAGTGGAAGGCTAACACAGAAAAACAGCAGAAGGAGGTG
AATAATGCCGATACCCAGGTAAATGTAGCTTAA

Protein sequence :
MAHYQVTVDCDLLQGLFIRDDGLARLVENIVNQILDAQATEQLRAKPYERTEERQGYRNGYRDKLLKSRVGELTLMVPRL
RSGHFSTELFERYQRSEQALLLAMVEMVVNGVSTRKVRAVVDELCGTEFSKSTVSSLCKRLDDIVKEWNERDLSSQEYPF
LLVDAIVIRVRKGGRVRLSSVLLATGINREGYREILGLMLGDSESEAAWSEFFGRLKERGLKGVDLVVSDDHKGLINAIE
THFQGATWQRCQTHFIRNILDACPKSLQGDLHGRLRLIFDAPDMETARRLLNETIEAFGARAPKAVERLEAGFEDAMAVM
ALPGRYRKRLRTTNGVERLNQEIRRRERVIRIFPNEESAVRLIGAVLVEIDEVWTTGKRYFDMAEYWEWKANTEKQQKEV
NNADTQVNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 7e-72 46
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 7e-72 46
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 7e-72 46
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 5e-72 46
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 5e-72 46
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 5e-72 46