Gene Information

Name : Tph_c23600 (Tph_c23600)
Accession : YP_006921049.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2382318 - 2383025 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence :

ATGAGCAAAAGTCCTAATAAGTGGATCATTGATGCCCGGAATATTGTTAAAGTATACCAGAGTGGCTCTGAAGAATTGAA
GGTTCTTGATAATATCAGTTTAACCGTACAAGAAAACGACTTTGTCGCCATTCTAGGACCTTCCGGATCAGGAAAATCCA
CTTTACTAAACATACTAGGATGCCTGGATCTTCCGACTTCTGGACAGTATTTTTTGGACGGAATTGATGTCCTTAAAGCC
AGGGACAATCAATTAGCTGAGATCCGCAACAAGAAAGTCGGGTTTGTTTTTCAGCAGTTTAACCTTTTACCCAGGTTAAC
CGTACTTCAGAACGTTACCCTTCCCTTGCTCTATCGGGGAGTGAACGAAGACGAAGCTGTTGCTTCAGCCAAGGAGAAGT
TGAAACAACTGGGGCTAGATCATAGACTAGATCACCGACCCTCTCAACTATCAGGAGGAGAGCAACAAAGGGTAGCCATT
GCCAGGGCAATCATAGGTAGCCCTCGTTTGATTCTGGCAGATGAGCCAACCGGAAACCTGGATAGCAAGTCAAGAGAAAA
TGTCATGGAAATATTTCAAGAACTTGATGGACAGGGGAACACGATAGTAATGATTACCCATGATCCTGAAGTGGCAGAAC
GGGCGAAAAAGGTGCTTTACATCCGTGATGGTAAAATCCTTGAGAGTGATCGGAAGTCTGGGGGTTAA

Protein sequence :

MSKSPNKWIIDARNIVKVYQSGSEELKVLDNISLTVQENDFVAILGPSGSGKSTLLNILGCLDLPTSGQYFLDGIDVLKA
RDNQLAEIRNKKVGFVFQQFNLLPRLTVLQNVTLPLLYRGVNEDEAVASAKEKLKQLGLDHRLDHRPSQLSGGEQQRVAI
ARAIIGSPRLILADEPTGNLDSKSRENVMEIFQELDGQGNTIVMITHDPEVAERAKKVLYIRDGKILESDRKSGG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Spaf_1862	YP_006310627.1	amino acid ABC transporter ATP-binding protein	Not tested	FWisland_2	Protein	1e-35	43
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-30	41

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Tph_c23600	YP_006921049.1	antimicrobial peptide ABC transporter ATPase	NC_012469.1.7686878.	Protein	1e-54	53
Tph_c23600	YP_006921049.1	antimicrobial peptide ABC transporter ATPase	CP001581.1.gene798.p	Protein	3e-41	46
Tph_c23600	YP_006921049.1	antimicrobial peptide ABC transporter ATPase	NC_008702.1.4606598.	Protein	4e-45	46
Tph_c23600	YP_006921049.1	antimicrobial peptide ABC transporter ATPase	CP001581.1.gene598.p	Protein	3e-38	42
Tph_c23600	YP_006921049.1	antimicrobial peptide ABC transporter ATPase	NC_012469.1.7686946.	Protein	1e-29	42