Gene Information

Name : Tph_c23370 (Tph_c23370)
Accession : YP_006921026.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2364714 - 2366282 bp
Length : 1569 bp
Strand : +
Note : -

DNA sequence :
ATGGCAGTCAGTAAAAATGTCACAGTTATTCCGGCCAGGAAGCATACTCGCAAGAGCAAGGACGAGGAAAAACCGAAACT
ACGCGTTGCTGCTTACTGCCGTGTTTCCACAGACAGCGAGGAGCAGGCTACCAGCTATGACACACAGATTGAGCATTACA
CTGCCTACATACAAGGGCACCCCGACTGGATGCTGGCAGGAATATTTGCTGATGACGGCATTTCCGGTACCAATACTAAG
AAGCGTGAAGAATTCAACCGCATGATTGACGAGTGTATGGCCGGTAATATCGATATGATCATCACAAAGTCCATTAGCCG
CTTTGCCCGAAACACACTGGATTGTTTGAAATATATCCGTCAACTTAAGGACAAGAACATTCCGGTCTATTTTGAGAAAG
AAAACATAAACACCATGGATTCCAAAGGTGAGGTAATGATTACGATCATGGCCTCTCTCGCCCAACAGGAAAGTCAGTCC
TTAAGCCAGAATGTTAAGCTAGGCTTGCAATACCGATATCAACAAGGTGAAATCCAAATCAACTGCGCCCGGTTTCTCGG
TTATACCAAGGATGAAAACAAACATCTAGTGATTGTTCCCGAGGAAGCTGAAATTGTAAAACGCATCTACCGAGAATACC
TTGAAGGCGCTAGTATGCTAAAGATAGCCCGTGGATTAGAAGCTGATGGAATTTTAAACGGAGCAGGCAATGAAAGATGG
CATACCAGCAATATAAACCACATCCTGCGGAACGAAAAATATATTGGGGATGCCCTTTTGCAGAAAACTTATACCGTTGA
CTTTCTAACAAAGAAACGCGTTAAGAACAACGGCATTGTTCCTCAATACTATGTAGAAAATAGCCATGAAGCCATTATCC
CGCGTGAAATTTTCATGCAGGTGCAGGAAGAGCTTATCCGCCGCCGTATTGTACACACAAGCCCGAACGGAAAGACCAGA
ACCTTTAGCAGCAACCACGTCTTCGCTCAGATAGTCATTTGCGGCAAATGTGGCGAGGTTTTTCGCAGGGTGCATTGGAA
TAACCGCGGGAAGAAATCCATCGTCTGGCGCTGTGTCAGTCGATTAGAAAATACAGGCTTGTTCTGCGATGCCCGCACGG
TATTGGAGAGCACCATCGAGCAAGTGCTGGTCACCGCTATTAATCAGACGCTCTGTGACAAGGACTCTTTCCTCACTACG
CTACGGGACAACATCGCCACTGTCATAAATAGAGAAAGCGACAAGGCCTTAGCGGATATCGATAAGCGGCTTGAGGAACT
GCAAACGGAACTGCTGAAGCTTGCCACCTCCAATGCCGATTATGATAAAGTCGGTGATGAGATTCACCGCCTTCGTGACC
AAAAGCAGAAGCTGCTTCTTGAAAACGCCAACCGTGATGAACTTAAAAAGCGTATGGCTGATATGAGCACATTCCTAAAA
AAGCAATCCACCGCCCTCGCCGAATATGACGAGAAGCTTGTCCGACGGCTTATTGAAAAGGTCAGCATCCACGAGGATAA
ATTCACTGTGGAATTTAAGTCCGGCTTAACGGTGGATGTGAATGAATAG

Protein sequence :
MAVSKNVTVIPARKHTRKSKDEEKPKLRVAAYCRVSTDSEEQATSYDTQIEHYTAYIQGHPDWMLAGIFADDGISGTNTK
KREEFNRMIDECMAGNIDMIITKSISRFARNTLDCLKYIRQLKDKNIPVYFEKENINTMDSKGEVMITIMASLAQQESQS
LSQNVKLGLQYRYQQGEIQINCARFLGYTKDENKHLVIVPEEAEIVKRIYREYLEGASMLKIARGLEADGILNGAGNERW
HTSNINHILRNEKYIGDALLQKTYTVDFLTKKRVKNNGIVPQYYVENSHEAIIPREIFMQVQEELIRRRIVHTSPNGKTR
TFSSNHVFAQIVICGKCGEVFRRVHWNNRGKKSIVWRCVSRLENTGLFCDARTVLESTIEQVLVTAINQTLCDKDSFLTT
LRDNIATVINRESDKALADIDKRLEELQTELLKLATSNADYDKVGDEIHRLRDQKQKLLLENANRDELKKRMADMSTFLK
KQSTALAEYDEKLVRRLIEKVSIHEDKFTVEFKSGLTVDVNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 2e-176 71
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 1e-151 60
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 1e-151 60