Gene Information

Name : Tph_c22970 (Tph_c22970)
Accession : YP_006920986.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Unknown
Product : resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2329010 - 2330578 bp
Length : 1569 bp
Strand : -
Note : -

DNA sequence :
ATGACAACCAGGAATGTTACGATAATTCCTGCTCGTAAGCGAATTGGGAATAGTGCAAAGGCCGAGGAATTGCCTAAGCT
TCGGGTGGCAGCCTATTGCCGTGTTTCTACGGACAGCGAAGAGCAGGCAACCAGTTATGAAGCACAGATCGAACATTACA
CCAATTACATTAAAAGCAATCCGGAATGGGAGTTAGCCGGCATATTTGCGGATGAAGGGATTACTGGAACCAACACGAAA
AAGCGTGAAGAGTTTAACCGGATGATAGAAGAATGTATGCAGGGCAAAATCGATATGATAATTACGAAATCTATCAGCCG
TTTTGCAAGAAATACGCTGGACTGCCTAAAGTACATAAGGCAGCTTAAAGAAAAAAATATTCCAGTTTACTTTGAAAAGG
AAAATATAAACACATTGGATTCCAAAGGGGAAATCCTGCTGACCATTATGGCTTCTTTGGCGCAGCAAGAAAGCCAATCG
TTAAGCCAGAATGTAAAACTGGGTATTCAGTACCGATATCAGCAAGGAAAAATCCATATTAATCACAACCGGTTTCTTGG
CTATACAAAGGATAAGGATGGCAATTTAGTTATCGTACCTGAAGAAGCAGAGATCGTTAAACGCATTTACAGAGAATACC
TTGAAGGTTCCAGTATGCTACAGATAGCAAGAGGTCTGGAAGCTGACGGAATTCTGACAGGTGCAGGCAATCACAGATGG
CATACCAGCACCATCAATAAGATTTTGAGGAATGAAAAATATATCGGTGATGCGCTGTTGCAGAAAACCTATACGGTAGA
TTTTTTATCGAAGAAAAGGGTACCTAATAACGGTATAGTTCCTCAATACTATGTAGAAAACAGCCATGAGCCCATAATCC
CGCGTGAAATCTTTATGCAGGTTCAGGAACAGCTTGTCAAAAGAAGATGTGTGCATATAAGTAAGAACGGAAAGAAGAGA
AACTATAGCAATAATCATCCTTTATCACAGATGGTCTTTTGCGGCAACTGTCATGAAATATTCCGCAGGGTTCATTGGAA
TAACCGAGGAAAGAAATCAATTGTATGGAGATGCGTCAGCCGATTAGAAAACACTGGTTTGTTTTGTACCGCTTCCACTA
TACTTGAAGATACGCTTAAAGAGAAAATTATAGAAGCCATTAATGTAGCGGTAAGCGGAAAAAACTCTTTTCTGGCCATA
CTGAAGAAGAATATTGAAACCGTACTAAGCGCGGATTTGGATGAGAGTACAGCAGATATTGATAAAAGGCTGGAAGAACT
CCAAACCGAGTTGATCCAAAAGGCAAATTCAAAGGAAAGCTATGATAATATTGTCAATGAAATTTACCGACTACGTGATC
TAAGGCAAGAAACTCTTTCGAGAAATGCTCTCCGCAAAGATAAGCGGGATCGGATTGCTGAGATGACGGACTTCCTTAAC
ACGCAAACGGGTGATATTACGGAGTTTGATGATAAACTGGTCAGAAAACTGATTGAAAAAGTGATTGTATATGATGATAG
GTTAGTGGTTGAGTTTAAGTCTGGGTTAGAAATAGAAGTGAATCTATAA

Protein sequence :
MTTRNVTIIPARKRIGNSAKAEELPKLRVAAYCRVSTDSEEQATSYEAQIEHYTNYIKSNPEWELAGIFADEGITGTNTK
KREEFNRMIEECMQGKIDMIITKSISRFARNTLDCLKYIRQLKEKNIPVYFEKENINTLDSKGEILLTIMASLAQQESQS
LSQNVKLGIQYRYQQGKIHINHNRFLGYTKDKDGNLVIVPEEAEIVKRIYREYLEGSSMLQIARGLEADGILTGAGNHRW
HTSTINKILRNEKYIGDALLQKTYTVDFLSKKRVPNNGIVPQYYVENSHEPIIPREIFMQVQEQLVKRRCVHISKNGKKR
NYSNNHPLSQMVFCGNCHEIFRRVHWNNRGKKSIVWRCVSRLENTGLFCTASTILEDTLKEKIIEAINVAVSGKNSFLAI
LKKNIETVLSADLDESTADIDKRLEELQTELIQKANSKESYDNIVNEIYRLRDLRQETLSRNALRKDKRDRIAEMTDFLN
TQTGDITEFDDKLVRKLIEKVIVYDDRLVVEFKSGLEIEVNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 0.0 72
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 3e-155 61
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 3e-155 61