Gene Information

Name : Tph_c21860 (Tph_c21860)
Accession : YP_006920877.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2218638 - 2218844 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
TTGATCAATAACATCCGCGCAATGCGTGAGCAAAGAGGTTGGACACAGGAACATTTGGCATCTTTAGTCCAGGTTTCACG
TCAAACCATCAACTCCCTGGAGGCGGGCCGGTACAAACCCTCTATTGTGCTTGCCCTAAAATTGGCACATGTTTTCAAGG
TGCCTTTGGAAGAGGTTTTTCAACTGGAAAGCACTGACTGGGAATAG

Protein sequence :
MINNIRAMREQRGWTQEHLASLVQVSRQTINSLEAGRYKPSIVLALKLAHVFKVPLEEVFQLESTDWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-10 50
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 6e-10 50
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 2e-08 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Tph_c21860 YP_006920877.1 DNA-binding protein VFG2168 Protein 2e-10 50
Tph_c21860 YP_006920877.1 DNA-binding protein VFG2175 Protein 2e-10 50