|
Name : serS (Tph_c00180) Accession : YP_006918771.1 Strain : Thermacetogenium phaeum DSM 12270 Genome accession: NC_018870 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase SerS Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 20406 - 21683 bp Length : 1278 bp Strand : + Note : - DNA sequence : ATGCTGGATCTGAAGTTTATCCGCAGTCACCCAGAAGTAGTCAAGAAAGCGCTGTCGGACAGGAACGTCGAATTTGATCT CGACCAGGTGCTGGCCTGGGATGAGGAGCGGCGTAGCAAGATCGCCGAGAGCGAAAGGCTGAAGAACAGGAGGAACACCC TCTCCCAGGAGGTGGGAAGGCTCAAGGCGGCCAAAGAGGACGCCGCCCACCTGATAGAAGAGGTGCGGGAGATATCCCGG CGCAGCAAGGAGATCGATCGGGAACTGAACGAGATCGAGCAGAAGCTGCAGCAAGCGCTGCTCCTGATCCCCAATATACC CCATGAGTCGGTACCTGTCGGCCCGGATGAGGGGGCCAATATCGTCCTGCGGGTGGAGGGCGAGCCCCCCAGCTTCGGCT TCGAACCCCGCCCCCACTGGGAGATCGGGGAGAACCTGGACATTTTGGATTTTGAACGGGGCGTAAAGGTGGCCGGGGCG CGGTTCACCGTTCTTAAAGGATGGGGGGCCAGGCTGGAGCGGGCGCTGGTCAACTTCATGCTGGATCTGCACACAGAGGA GCACGGGTACACGGAGATCTTCCCGCCCTTCCTGGTCAACCGCGCAACCATGACCGGCACCGGTCAGCTCCCCAAGTTCG AGGAGGACCTCTTTTACTGCAACAGGGAGGACCTTTTCCTCATCCCTACTGCTGAGGTTCCGGTTACCAATCTGTACAGC GACGAGATCCTGCCCGGGGAGGTGCTTCCCATCTACCATACGGCCTATACCGCCTGTTTCCGGGCGGAAGCCGGGGCGGC AGGCCGGGATACCAGGGGACTCATCCGCCAGCACCAGTTCAACAAGGTGGAGCTGGTGAAGTTCACCACCCCGGAGGATT CCTATCTGGAGCTGGAGAAGCTGACCGCCGATGCCGAGGATGTGCTGCGCCGCCTGGGGCTGGCCTACCGGGTGGTTTCC CTCTCGACGGGGGACCTGGGCTTCTCTGCCGCCAAAACATATGACCTGGAAGTCTGGTTCCCGGCGGCCGGCACCTACCG GGAGATCTCATCTTGCAGCAACTTCGAGGACTTCCAGGCGCGGCGGGCGAACATCCGTTACCGGCCGGAGGCGGGGGCAC GCCCGCGCTTCGTACACACCCTGAACGGCTCCGGGGTGGCGGTCGGCCGCACCGTAGCTGCGATCCTGGAGAACTACCAG CGGGAGGACGGTTCGGTGGTGGTTCCCGAGGTGCTCAGGCCATACATGGGCATCGACGTCATCACCGGGTCGAGGTAA Protein sequence : MLDLKFIRSHPEVVKKALSDRNVEFDLDQVLAWDEERRSKIAESERLKNRRNTLSQEVGRLKAAKEDAAHLIEEVREISR RSKEIDRELNEIEQKLQQALLLIPNIPHESVPVGPDEGANIVLRVEGEPPSFGFEPRPHWEIGENLDILDFERGVKVAGA RFTVLKGWGARLERALVNFMLDLHTEEHGYTEIFPPFLVNRATMTGTGQLPKFEEDLFYCNREDLFLIPTAEVPVTNLYS DEILPGEVLPIYHTAYTACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTTPEDSYLELEKLTADAEDVLRRLGLAYRVVS LSTGDLGFSAAKTYDLEVWFPAAGTYREISSCSNFEDFQARRANIRYRPEAGARPRFVHTLNGSGVAVGRTVAAILENYQ REDGSVVVPEVLRPYMGIDVITGSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-112 | 60 |
