Gene Information

Name : xerD (Tph_c16080)
Accession : YP_006920312.1
Strain : Thermacetogenium phaeum DSM 12270
Genome accession: NC_018870
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1623320 - 1624201 bp
Length : 882 bp
Strand : -
Note : -

DNA sequence :
ATGGGTGTTTTGTGCGACTTTTTAAGCTTTCTCCAGGTTGAGAGGGGTCTTTCCCGGAATACGGTACAGTCTTACCGCTA
TGATCTGGAGCATTTTATATCTTTTTTGTCCGGACAAGGCTGCAGACCGGAACAGGCCACACAGACTGCGATTTTGAGCT
TTATGAATTACCTCCAGATGCAAAACCGGAGCGCACGGACGCGATCCCGGAAGCTAGCGGCTATCCGCACCTTTTATCGC
TATCTGCTACAGGAGGGGCGGATCGGCTTGGATCCTACCGAGAACCTGACTTCGCCCAAGCTGGAGAGGGTTTTGCCCCG
GGTGTTGAGTGTTGGAGAGGTGGAACTCCTTCTTTCCCAGCCTGATACCAGAACCGTGATCGGGCTGCGGGACAAGGCTA
TGCTGGAACTGCTTTATGCCACAGGGATGCGGGTTTCGGAAATGCTCAGCCTCAATACGGAGCACCTGAATCTCGATCTG
GGGTTTGTCCGCTGCCTCGGAAAGGGTTCGAGGGAGCGGATTATCCCAGTCGGTGAAGTGGCATTGCGCTATTCCAGGGA
ATACCTTTCCCGGGGGCGGTTAAAGCTAAGAAAAAACAATTGGGAAAGGGCGCTTTTCTTAAACAGGCACGGTAGCCGCC
TGAGCAGACAGGGCTTCTGGAAAATACTTAAGGGCTACGCCCGCAGGGCCGGGATTACTAAAGAGATTACACCGCATGTC
CTGCGGCACTCCTTTGCCACCCACCTACTAGAAAACGGGGCGGATTTGCGGGTGGTTCAGGAAATACTAGGGCATGCCGA
TGTTACTACAACGCAGATCTACACGCATTTGAGCCAGGGAAAGTTGAGGGATGTTTATGAGAAAGCCCACCCGCGGTCTT
AG

Protein sequence :
MGVLCDFLSFLQVERGLSRNTVQSYRYDLEHFISFLSGQGCRPEQATQTAILSFMNYLQMQNRSARTRSRKLAAIRTFYR
YLLQEGRIGLDPTENLTSPKLERVLPRVLSVGEVELLLSQPDTRTVIGLRDKAMLELLYATGMRVSEMLSLNTEHLNLDL
GFVRCLGKGSRERIIPVGEVALRYSREYLSRGRLKLRKNNWERALFLNRHGSRLSRQGFWKILKGYARRAGITKEITPHV
LRHSFATHLLENGADLRVVQEILGHADVTTTQIYTHLSQGKLRDVYEKAHPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 5e-45 47
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 5e-45 47