Gene Information

Name : M5M_04125 (M5M_04125)
Accession : YP_006915762.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Unknown
Product : aminotransferase AlaT
Function : -
COG functional category : -
COG ID : -
EC number : 2.6.1.2
Position : 899622 - 900839 bp
Length : 1218 bp
Strand : +
Note : COG0436 Aspartate/tyrosine/aromatic aminotransferase

DNA sequence :
ATGGACCACATCTATAAATCTGACAAGCTTCACGGTGTTTGCTACGAAATTCGCGGCCCGGTGCTCGAACATGCGCACCG
TCTGGAAGAAGAAGGCCATCGGATTCTTAAACTCAACATCGGCAACCCGGCCCCCTTTGGCTTTGACGCGCCTGACGAAA
TTATTCTGGATGTGATTTATAACCTGCGCAATGCCCAGGGATATACCGAGTCCAAAGGCCTTTTCGCTGCCCGTAAGGCA
ATCATGCAGGAGTGTCAGACACTCGGCATACCCAACGTGGAAATTGATGACATTTATCTGGGCAATGGCGTGTCTGAATT
AATTGTCATGTCCATGCAGGCGCTACTCAATAACGGTGACGAAATTCTGGTACCGGCACCCGATTACCCGCTCTGGACCG
CCGCGGTCAAATTAGCCGGCGGCAACCCTGTTCACTACCTGTGCGATGAACAGGCCGACTGGTTTCCCGATATCGACAAC
ATCCGCTCGCGCATCACCGACAAGACCCGCGGCCTGGTGATTATTAACCCCAATAATCCGACTGGTGCAGTGTATAGCCA
GGATTTGCTCGAACAGCTGGTGGCGTTGGCCCGCGAACACAATCTGATCGTTTTCGCCGACGAGATCTACAGCAAAATCC
TCTATGATAACGCCGCTTTCGTGCCACTGGGCCGGCTCGCCGACGACATTGTCTGCCTGAGCTTTAACGGCTTGTCAAAA
AATTACCGTCTGGCCGGATTCCGCGCAGGCTGGATGACCATCACAGGCGCCAAACATAAGGCCCGGGGATACATCGAAGG
CCTGAATATGCTGGCATCCATGCGCCTGTGCGCCAACGTACCTGCCATGTTTGCCATTCAAACTGCGCTGGGCGGTTATC
AGAGCATCAACGAACTGATTGCCCCGGGTGGGCGTTTGTACGAGCAACGCGAAGCCGCTTACAATGCGCTATCGCAAATA
CCGGGCGTCAGCTGTGTTAAACCCAAGGGAGCACTTTACATGTTCCCTAAAATCGACCTCAGCCAGAAAGCCATCAAAGA
TGACCAGCAAATGGTATTGGACTTTTTGCTTCAAGAAAAAATACTGATCGTCCAGGGTACCGCGTTCAACTGGCCGACAC
CGGATCATTTCAGGGTGGTTTTTTTGCCGCGTCAGGATGAAATCACCCGCGCAATGAAACAGTTCGGCAAATTCATAGCC
AAGTACAGTCAAGCCTGA

Protein sequence :
MDHIYKSDKLHGVCYEIRGPVLEHAHRLEEEGHRILKLNIGNPAPFGFDAPDEIILDVIYNLRNAQGYTESKGLFAARKA
IMQECQTLGIPNVEIDDIYLGNGVSELIVMSMQALLNNGDEILVPAPDYPLWTAAVKLAGGNPVHYLCDEQADWFPDIDN
IRSRITDKTRGLVIINPNNPTGAVYSQDLLEQLVALAREHNLIVFADEIYSKILYDNAAFVPLGRLADDIVCLSFNGLSK
NYRLAGFRAGWMTITGAKHKARGYIEGLNMLASMRLCANVPAMFAIQTALGGYQSINELIAPGGRLYEQREAAYNALSQI
PGVSCVKPKGALYMFPKIDLSQKAIKDDQQMVLDFLLQEKILIVQGTAFNWPTPDHFRVVFLPRQDEITRAMKQFGKFIA
KYSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-123 61
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-123 61
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 4e-123 61
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 4e-123 61