Gene Information

Name : M5M_03425 (M5M_03425)
Accession : YP_006915624.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 755658 - 756350 bp
Length : 693 bp
Strand : -
Note : COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component

DNA sequence : 
TTGTTATCGGCAACCCGCATCAGTAAAACCGTGATGACCCAGTCCGGCCCGCTTACCATTCTGGATAACGTCAATCTCTC
GCTGGCTGCAGGTAAAAGCCTGGCCATTGTGGGGGCTTCAGGGTCCGGTAAATCCACGCTGCTGGGCATATTGGCCGGTC
TAGATACGCCCTCGGAAGGCGATGTGATCATGGATGGCCAATCGATCACAGCGCTGACGGAAGATGAGCGGGCCACAATC
CGGTTACAGAGTGTGTCATTCGTATTTCAGTCATTCCAGCTATTGCCGGGCCTGAGCGCGCTGGAAAACGTGCTGCTGCC
GCTTGAGCTCAAGGGTGTCGCCAACGCACGGGATAAAGCCGAACATTATCTGACCCAGGTGGGCCTGGCCGACCGGCTGC
ATCATTTCCCGCCGCAATTGTCGGGTGGTGAGCAACAGCGTGTAGCGGTAGCGCGCGCATTTGCCAATGAACCCCGTATT
TTGTTTGCCGACGAGCCCACAGGTAATCTGGATGCGCAGACCGGCGAGCGGATCATTGATTTGCTGTTCGACATGAATCA
GCGATCCGGCACCACGCTGGTATTGGTGACCCACGAACAGCGACTGGCGGCCCGTTGTCATCAGCAGTTGGTGATTGAAG
CCGGCAAGGTGGCGCAAGCGGTTGATGAAACCGGGAGTTTGCAACCGTGTTGA

Protein sequence : 
MLSATRISKTVMTQSGPLTILDNVNLSLAAGKSLAIVGASGSGKSTLLGILAGLDTPSEGDVIMDGQSITALTEDERATI
RLQSVSFVFQSFQLLPGLSALENVLLPLELKGVANARDKAEHYLTQVGLADRLHHFPPQLSGGEQQRVAVARAFANEPRI
LFADEPTGNLDAQTGERIIDLLFDMNQRSGTTLVLVTHEQRLAARCHQQLVIEAGKVAQAVDETGSLQPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_03425 YP_006915624.1 ABC transporter-like protein NC_008702.1.4606598. Protein 7e-35 45
M5M_03425 YP_006915624.1 ABC transporter-like protein NC_012469.1.7685735. Protein 2e-36 45
M5M_03425 YP_006915624.1 ABC transporter-like protein NC_012469.1.7686878. Protein 2e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_03425 YP_006915624.1 ABC transporter-like protein VFG2059 Protein 6e-19 42