Gene Information

Name : M5M_02885 (M5M_02885)
Accession : YP_006915522.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : response regulator receiver domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 636700 - 637377 bp
Length : 678 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :

ATGCGCTTGTTAGTGGTTGAAGATGAAGTGAAAACCGGTGACTACCTGAAGCAGGGCCTGACGGAGGCAGGCTTCATGGT
AACACTGGTACGCAATGGGCTTGATGGCCATCATCTGGCCATGACGGAGTCCTACGATTTGTTGGTGCTTGATGTCATGC
TACCGGATGTTACCGGGTGGCGCATCCTGCAATCGATCAGGGAAGCCGGCCATCAAACCCCGGTGCTTTTCCTCACTGCC
CGCGACAGCATCGATGACCGCGTCAAAGGCTTAGAGCTGGGCGCAGATGACTATCTGGTTAAGCCGTTTGCCTTTGCAGA
ATTACTGGCGCGGGTACGCACATTGCTTCGCCGGGGGGCTACTCCAGCATTGACGGATCAGATTAAAGTGGCCGATTTAA
CTCTTGATCTGCACCGCCACCGAGCGGTTCGGGCCGGCCAGAAAATCAACCTCAGCCACAAAGAATTTTGCTTGTTAGAA
CTGCTGGTTCGCCGACAAGGTGAGGTGCTGCCGCGTTCGCTGATTGCCTCGCAGGTGTGGGATATGAATTTTGACTCAGA
CACCAATGTCATCGATGTGGCCATTCGCCGTTTAAGAAGCAAGGTGGATGAGGGATTTCAATCCAAGCTGATCCACACCG
TACGTGGAATGGGTTACAAGCTTGACGTTGAGGAGTAA

Protein sequence :

MRLLVVEDEVKTGDYLKQGLTEAGFMVTLVRNGLDGHHLAMTESYDLLVLDVMLPDVTGWRILQSIREAGHQTPVLFLTA
RDSIDDRVKGLELGADDYLVKPFAFAELLARVRTLLRRGATPALTDQIKVADLTLDLHRHRAVRAGQKINLSHKEFCLLE
LLVRRQGEVLPRSLIASQVWDMNFDSDTNVIDVAIRRLRSKVDEGFQSKLIHTVRGMGYKLDVEE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	2e-53	56
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	2e-52	55

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0111	Protein	2e-67	66
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0638	Protein	1e-60	66
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0083	Protein	9e-66	65
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0197	Protein	2e-62	64
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0347	Protein	1e-60	62
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0308	Protein	4e-61	62
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	BAC0125	Protein	2e-58	60

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	VFG0596	Protein	7e-54	56
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	VFG1390	Protein	5e-35	42
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	VFG1386	Protein	3e-30	41
M5M_02885	YP_006915522.1	response regulator receiver domain-containing protein	VFG1389	Protein	2e-30	41