|
Name : M5M_19395 (M5M_19395) Accession : YP_006918731.1 Strain : Simiduia agarivorans SA1 Genome accession: NC_018868 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : - COG ID : - EC number : - Position : 4260863 - 4263484 bp Length : 2622 bp Strand : - Note : COG0249 Mismatch repair ATPase (MutS family) DNA sequence : ATGACCCAGGCCGTTCAAGATTTGTCCAACCACACCCCCATGATGCAGCAATACCTGCGCATCAAAGCCGAACACCCCCA CGAGCTGGTGTTCTACCGCATGGGTGATTTCTATGAACTGTTCTTTGACGATGCCAAGAAAGCCGCCGAGCTGCTGGACG TAACCCTGACCGCGCGCGGCAAATCCAACGGCGACCCGATACCCATGGCCGGCATTCCCTTCCACGCGGCCGACGGCTAC CTGGCCCGGCTGGTGAAACTGGGCGAATCCGTGGCCATCTGTGAGCAGATTGGCGACCCGGCCACCAGCAAGGGGCCGGT GGAGCGTCAGGTGGTGCGCATCGTCACACCCGGCACCGTGAGCGATGAAGCATTACTGGACGAACGGCAGGACAACTGGC TGGCCGCCGTGTGCCAGCGCGAAAACACCTTCGGTCTTGCCCTGTTGGACATAGGCACCGGCCGCTTTGTGCTGCTGGAA GTAGAAGGCGAAGAAGCGCTTGCCGCCGAATTGCAGCGCCTGAACCCGGCCGAAGTGCTGGTGGCCGATGACCTGACAGA ATTGGAAAGCCTGAGCCGGCGACGGGGCCTGCGCCGGCGTGCGCCCTGGGAGTTTGAATTCGACACCGCCACGCGCCTGC TGAACCAGCAATTCGGCACCCAGGATCTGGACGGTTTCGGCTGCGGGCATCTGGTCACTGCCCTCGGTGCCGCCGGTTGC CTGTTGGCCTATGCACGCGAAACCCAGCGTACGGCCCTGCCCCATATCCGCAGCCTGCGCCACGAAAACCGCGAGGAAGC CGTGGCCATGGACGCTGCCACCCGCCGCAACCTGGAATTGGATACCAATCTGGGCGGGGGCGAGGAGAACACGCTGCTGT CGGTAATGAATACCGGCGTCACCGCCATGGGCCGGCGCCTGATGCGGCGCTGGATCAACCGGCCCTTGCGCGATCGCCAA CTGCTGGTGCGCCGGCAGGACGCCATCAGCTGGCTGTTGTCGGACTATACCTTTGAGCCCCTGCGCCAGACCTTAAAGCA AGTGGGCGATATGGAACGCATTCTGGGCCGGCTGGCTTTGCGCTCGGCCCGCCCGCGGGATTTGTCGCGCCTGTTGAGCT CGCTGGCCAGCTTCCCTCAATTGCAGCAACAGCTGAAGCCGTCCGACGCCGCTCACCTGAAAACGCTGGCCACACAAATC GGCGAATTTCCCGCATTGGTGGATCTGCTGGATCGCGCGTTGGTGGAAAACCCGCCGGTGGTAATCCGCGAAGGCGGTGT CATTGCCGAAGGTTTTGATGCCGAGTTGGACGAGTTGCGCAACATCAGCACCAATGCCGGCCAGTTCCTGATTGATCTGG AAACCCGCGAGCGCGAGCGCACCGGGCTTTCGACCCTGAAAGTCGGCTACAACCGGGTCCATGGTTATTTCATCGAACTG AGCAAAGGCCAGGCCAAAGATGCGCCGGCCGATTATGTGCGGCGCCAGACCCTGAAAAACGCCGAACGCTACATCACACC GGAACTCAAGACCTTTGAAGACAAGGCATTGTCGGCCAAAAGCCGTGCACTCAGCCGCGAAAAAGCGCTGTACGACGAGC TGCTGGAAACCCTCAATGCCGATCTGGTGGCCTTGCAGGATGCCGCAGCCGCGGTATCGGAACTGGATGTGCTTTGCTCG CTGGCCGAGCGGGCCGAAAGCCTGAACCTCACCAAACCTGTACTGGCGGAAACACCCGGCATTCATATCGTCGCCGGCCG CCACCCGGTGGTGGAGCAGGTATCGAGCAAGCCGTTTGTGGCCAATGACCTCACGCTCAACCCGGAACGTCACATGCTGG TGATTACCGGCCCGAACATGGGCGGTAAATCAACCTACATGCGCCAGACCGCCCTGATTGTGCTGCTGGCCCAGATTGGC AGCTTTGTACCGGCCACCGAGTGCACACTGGGGCTGGTGGATCGCATTTTCACCCGTATCGGCTCTTCAGACGACCTGGC CTCTGGCCGGTCCACCTTCATGGTGGAAATGACCGAAACCGCCAACATCCTGAATAACGCCACCGCCAACAGCCTGGTAT TGATGGATGAAGTGGGCCGCGGCACCAGCACCTTCGACGGTCTTTCCCTGGCCTGGGCCGCGGCCCTGCACCTGGGCCAG CAGATCAAGGCCTTTACCCTGTTCGCCACCCACTACTTCGAAATCACCAGCCTGCCGGAGACAGTCAGCGGTATCGCCAA CGTGCACCTCACCGCCACTGAGCACAACGACAATCTGGTGTTCCTGCACCACATTCAGGAAGGTGCGGCCAGCCAGAGCT TTGGTTTACAGGTGGCCAAGCTCGCCGGCATCCCGGCGCAGGTATTGGCCTTGGCGCGCGAACAGCTGGCACAGCTGGAG GCCGGCAGCCATGCCACGGTGGTACCCGCCGCGGTGGCGCCCGTTGAACCTGCGCCCGCCAAAACCCCGACCCCGGCCAA ACAGCCCGTCGATCCGTTCCAGGCCGAATTATTTGGCGCCGAGCCCCACCCGGTGATTACCCAATTGGGCAAACTCGATG TGGATGACCTGAGCCCACGCGCCGCACTGGAGCTTTTGTACGCGCTTAAAAAAGCCCTCTGA Protein sequence : MTQAVQDLSNHTPMMQQYLRIKAEHPHELVFYRMGDFYELFFDDAKKAAELLDVTLTARGKSNGDPIPMAGIPFHAADGY LARLVKLGESVAICEQIGDPATSKGPVERQVVRIVTPGTVSDEALLDERQDNWLAAVCQRENTFGLALLDIGTGRFVLLE VEGEEALAAELQRLNPAEVLVADDLTELESLSRRRGLRRRAPWEFEFDTATRLLNQQFGTQDLDGFGCGHLVTALGAAGC LLAYARETQRTALPHIRSLRHENREEAVAMDAATRRNLELDTNLGGGEENTLLSVMNTGVTAMGRRLMRRWINRPLRDRQ LLVRRQDAISWLLSDYTFEPLRQTLKQVGDMERILGRLALRSARPRDLSRLLSSLASFPQLQQQLKPSDAAHLKTLATQI GEFPALVDLLDRALVENPPVVIREGGVIAEGFDAELDELRNISTNAGQFLIDLETRERERTGLSTLKVGYNRVHGYFIEL SKGQAKDAPADYVRRQTLKNAERYITPELKTFEDKALSAKSRALSREKALYDELLETLNADLVALQDAAAAVSELDVLCS LAERAESLNLTKPVLAETPGIHIVAGRHPVVEQVSSKPFVANDLTLNPERHMLVITGPNMGGKSTYMRQTALIVLLAQIG SFVPATECTLGLVDRIFTRIGSSDDLASGRSTFMVEMTETANILNNATANSLVLMDEVGRGTSTFDGLSLAWAAALHLGQ QIKAFTLFATHYFEITSLPETVSGIANVHLTATEHNDNLVFLHHIQEGAASQSFGLQVAKLAGIPAQVLALAREQLAQLE AGSHATVVPAAVAPVEPAPAKTPTPAKQPVDPFQAELFGAEPHPVITQLGKLDVDDLSPRAALELLYALKKAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M5M_19395 | YP_006918731.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 63 |
