Gene Information

Name : M5M_01470 (M5M_01470)
Accession : YP_006915251.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : GacA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 316528 - 317103 bp
Length : 576 bp
Strand : +
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence :
TTGGAAGTCGTAGGCGAGGCAGACAGCGGGGAAGCTGCCATTAAGCTGACCAAGGAACTGGCACCCAACGTAATTCTGAT
GGATGTGAAAATGCCCGGCATTGGCGGTCTTGAGGCCACCAAAAAGCTGTTGCATTGGCATCCCGATGTGAAAATTGTCG
CCGTTACAGCCTGTGACGACGACCTTTACCCCCAGCGCTTGTTGCAGGCGGGTGCGGCCGGGTATATCACCAAGGGTGCA
GACCTCAATGAAATGATTGAGGCGGTGCGAACGGTGACGCGCGGCGATATTTATATGAGCAATAATATTGCTCGCCAGCT
GGCCATGAAGAACTTCGGCGGCCGCAAGGGTGAGCAGTCGCCCTTTGAGTTATTGTCCGAGCGCGAGCTGCAAACAGCGC
TGATGATTGCCAACGGTCAGAAAGCGCCGGATATCGCCAATACCTTCAATGTGAGCCCGAAAACCGTTAACACCTACCGT
TACCGGATTTTCGAAAAGCTGAATATCAACAGTGATGTGGAGCTGACGTTGTTGGCGGTAAAGCATCATGTGCTGGACCC
GGAATCAGTGGTGTAA

Protein sequence :
MEVVGEADSGEAAIKLTKELAPNVILMDVKMPGIGGLEATKKLLHWHPDVKIVAVTACDDDLYPQRLLQAGAAGYITKGA
DLNEMIEAVRTVTRGDIYMSNNIARQLAMKNFGGRKGEQSPFELLSERELQTALMIANGQKAPDIANTFNVSPKTVNTYR
YRIFEKLNINSDVELTLLAVKHHVLDPESVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 3e-42 51
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 3e-42 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_01470 YP_006915251.1 GacA VFG1889 Protein 2e-42 49