Gene Information

Name : rph (M5M_12770)
Accession : YP_006917436.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 2803409 - 2804128 bp
Length : 720 bp
Strand : +
Note : COG0689 RNase PH

DNA sequence :
ATGCAAAGACCCAGCGGCCGTGCCGTCGATCAACTGCGCGATGTGCGCATTACCCGTCACTTCACCTGTCACGCCGAAGG
TTCGGTGCTGGTTGAGTTTGGCAACACCAAAGTCATTTGCACCGCCAGCGTGGAGGAAGGCGTGCCGCGCTTCCTGCGCG
GCGAAGGTCAGGGTTGGATCACGGCCGAATACGGCATGTTGCCCCGCTCCACCGGTACCCGCATGGGCCGTGAGGCGGCG
CGCGGTAAACAGGGTGGGCGCACGGTGGAAATCCAGCGTCTGATCGGTCGTTCATTGCGCGCAGCTGTGGACCTGAAAGC
GCTGGGCGAAAATACCATCACCATTGACTGCGATGTGATTCAGGCCGATGGCGGCACCCGCACGGCGTCCATTACCGGCG
CCTGCGTGGCGCTGGCAGATGCGATTGCGTACCTGAAAGAAAAAGGCCTGGTAAAAGGGGAACCGCTGGCGCGCATGATC
GCATCGGTATCGGTGGGAATTTACCAGGGTGTGCCGGTGTTGGATCTGGATTACCCGGAGGATTCGGGCGCGGAAACGGA
CATGAATATCGTCATGGGCAATGACGGTGGCATCATTGAAATTCAGGGTACCGCAGAAGGCGAGCCGTTTACCGAAGCGG
AATTCGCCGCCATGTTGGCGCTGGCCAAGAAAGGCATTGCGGATCTGAATCAGTTGCAGCAGGCGGCGCTGGCACAGTAA

Protein sequence :
MQRPSGRAVDQLRDVRITRHFTCHAEGSVLVEFGNTKVICTASVEEGVPRFLRGEGQGWITAEYGMLPRSTGTRMGREAA
RGKQGGRTVEIQRLIGRSLRAAVDLKALGENTITIDCDVIQADGGTRTASITGACVALADAIAYLKEKGLVKGEPLARMI
ASVSVGIYQGVPVLDLDYPEDSGAETDMNIVMGNDGGIIEIQGTAEGEPFTEAEFAAMLALAKKGIADLNQLQQAALAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-67 66