Gene Information

Name : M5M_12730 (M5M_12730)
Accession : YP_006917428.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2794835 - 2796916 bp
Length : 2082 bp
Strand : -
Note : COG1200 RecG-like helicase

DNA sequence :
TTGAGTGGTGCACCCACACTTGACCGGGTCGATGTCACCGCGCTCAAAGGCGTGGGCAAATCACTGGCGGAAAAGCTCGC
GCGCATCGGCCTGCACACGCTGCAAGACCTGCTGTTTCACCTACCCACCCGCTACCTGGACCGGACCCGTGTCACCCCCA
TCGGGGCTCTGCAACCCCAGGTCAGCGCCGTGGTCGAGGGGGAGATCCGGGCGGCCGACGTGGTGTTTGGCCGCCGCCGG
TCCCTGGTGGTCAAACTGGCCGACAATACCGGTGTCCTTACCCTGCGGTTTTACCATTTCAATCAGGCGCAGAAACAGGC
GCTCGGTAAAGGCGTGCGCCTGCGCTGCTATGGCGAAGCCCGCCGGGGCGCCGCCGGGCTGGAGTTTTATCACCCCGAAT
ACGAAAACGCCGATAAAACCCAAGCCCTGACCGCCACCAGCCTGACGCCCATCTACCCCGCCACCGAGGGCATCACTCAG
CCGCGTTTGCGCAGCCTCACCACGCAGGCGCTGGCATTTCTGGACGCCGGCGCACTGCGCGAATTATTGCCCGCCGACTT
GCGCCACCATTACCAGCAATGGCCGCTGGAGCAGGCCATCCGCTACCTGCACCAGCCACCGGTGGACGCCAATCTGCAGG
AACTGATGCAGGGCTTGCACCCGGCCCAGCAACGCCTGGCGTTTGAAGAATTGATGGCTCACAACCTCAGCCTGTTGCGC
CTGCGCCAGGCCATCCAGTCCGAATCGGCGCCGGTGTTGGCCACCAATACCGACCTGCTGACGCGGTTTCTGGCCCGGCT
GCCGTTTGCCCCCACCGGCGCGCAAACCCGGGTCGGCAGGGAAATCGCCCACGATCTGGCCAAGCCGGTGCCCATGCTCC
GGCTGGTACAGGGCGATGTGGGCTCGGGTAAAACCCTGGTGGCTGCCATGGCGGCGTTATCGGCCATTGGCAACGGCTAC
CAGGTGGCGCTGATGGCACCCACCGAAATCCTTGCCGAGCAGCACCTCAATAATTTCCGGCAATGGTTTGAACCGCTGGG
CATTCACGTGGGTTGGCTGGTGGGCAAACAGAAGGCGGCGGCCCGGCGGGAATCCCTGGCGGAGCTGTCTGCGGGTAAAA
CCCAACTGGTGGTGGGCACCCATGCCCTGTTTCAGGAAGACGTCGACTTTGCCGACCTGGGCCTGGTGATCATCGACGAG
CAACACCGCTTTGGCGTGCACCAACGCCTGAGCCTGCGCGCCAAAGCCGGCAGTGAACGGCGACCGCACCAACTGATCAT
GACCGCCACGCCCATCCCGCGCACCCTGGCCATGAGTGCCTATGCCGATCTGGATTGCTCGGTCATCGACGAGCTGCCGC
CCGGGCGCAAGCCGGTAACCACGGTGGTGATCAGCCAGGACCGGCGGGCGCAGGTGATCGACCGGGTGCGCGCAGCCATC
GCCGAGGGGCGACAGGTGTATTGGGTCTGCACCCTGATTGAAGAGTCCGAAACATTGGAGGCACAGGCCGCGGAAGCCGC
CCAGCAGGAGCTGGCCCTGTGCCTGCCCGACACCCCCATCGGGCTGGTGCACGGGCGACTGAAACCGGCCGAGAAGGAGG
ACGTGATGCGGGCCTTTAAAGCCGCCGAGATCCCTTTGCTGGTGGCAACCACCGTGATCGAAGTGGGCGTGGACGTGCCC
AACGCCAGCCTGATGATCATCGACAACCCCGAACGTCTGGGCCTGGCGCAATTGCACCAGTTGCGCGGTCGGGTGGGGCG
GGGCAGTGCCGAGAGCCATTGCGTTCTGCTGTATTCGGGGCCTCTTTCTCAGCATTCCCGCGCCCGTCTGGAAGCCATGC
GCGCCAGCAATGATGGTTTTGCGATTGCGGAAAAAGACCTGGAATTGCGCGGGCCGGGCGAGGTGTTGGGCACCCGCCAA
ACCGGCGAAATGAACCTGCGCATTGCTGATTTACAGCGGGATGGCGAACTCATCCCTCAAGTTAAGGCCGCCGCGGCCGA
TCTGCTCAAGGCGTACCCGGCCGAAAGCGAGGCTCTGATCCGGCGTTGGCTCGGATATAACGAGGAGTACGCAAAAGTGT
AG

Protein sequence :
MSGAPTLDRVDVTALKGVGKSLAEKLARIGLHTLQDLLFHLPTRYLDRTRVTPIGALQPQVSAVVEGEIRAADVVFGRRR
SLVVKLADNTGVLTLRFYHFNQAQKQALGKGVRLRCYGEARRGAAGLEFYHPEYENADKTQALTATSLTPIYPATEGITQ
PRLRSLTTQALAFLDAGALRELLPADLRHHYQQWPLEQAIRYLHQPPVDANLQELMQGLHPAQQRLAFEELMAHNLSLLR
LRQAIQSESAPVLATNTDLLTRFLARLPFAPTGAQTRVGREIAHDLAKPVPMLRLVQGDVGSGKTLVAAMAALSAIGNGY
QVALMAPTEILAEQHLNNFRQWFEPLGIHVGWLVGKQKAAARRESLAELSAGKTQLVVGTHALFQEDVDFADLGLVIIDE
QHRFGVHQRLSLRAKAGSERRPHQLIMTATPIPRTLAMSAYADLDCSVIDELPPGRKPVTTVVISQDRRAQVIDRVRAAI
AEGRQVYWVCTLIEESETLEAQAAEAAQQELALCLPDTPIGLVHGRLKPAEKEDVMRAFKAAEIPLLVATTVIEVGVDVP
NASLMIIDNPERLGLAQLHQLRGRVGRGSAESHCVLLYSGPLSQHSRARLEAMRASNDGFAIAEKDLELRGPGEVLGTRQ
TGEMNLRIADLQRDGELIPQVKAAAADLLKAYPAESEALIRRWLGYNEEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-100 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_12730 YP_006917428.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 65