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Name : M5M_12145 (M5M_12145) Accession : YP_006917323.1 Strain : Simiduia agarivorans SA1 Genome accession: NC_018868 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2686405 - 2687838 bp Length : 1434 bp Strand : - Note : COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB DNA sequence : ATGAGTGATCTGCTGCCCTTCAGCTTTGCCCAGACTCACGGCGTTCTGTTGGACGAGGGCAAGTTGTTGCACAAGCCGGG CTTGCACCACGAGGTGTTGGCCGAACTGCAGCGCTGTTGTGCCGAGCCGTTTGAATTGGAAGAAATTGCCGAGGCCGATT TCAAACAACGTCTGAAAGATGTGTACCACGACGATTCTGATGCGGCGCAGCAGGCGGTGGCCGACATGGATCTGTCCCAG CTGATTGACGACATCCCCGAAGAGGGTGATTTGCTGGCCGGCAATAACGATGCGCCGGTGATCCGCCTGATCAATGCGAT TCTCGCCCAGGCCGTTAAAGCCAAAGCCTCCGACATTCACCTGGAGCCCTGTGAAGACCGGGTGGCTGTGCGTTTTCGCG TGGATGGCGTGTTAAATGAAATCATGCAGGCCAAACCGCAGTTGGCGCCGCTGATCAATTCCCGCATTAAGGTGATGGCG CGGCTCGACATCGCCGAAAAGCGTTTGCCTCAGGATGGTCGCATGAGTGTGACCCTGGCCGGCCACACCATTGATATCCG GGTCAGTACTTTGCCGTCCGCCTACGGCGAGCGCGCAGTATTGCGTATTCTCGATCAGGCCGCCGGCGCGTTGAAATTAC ACCAGCTGCAAATGCCGGAAAAAACCCACAAGGCGTTTGCCGGCGCCCTGCAAAAACCGCACGGCATTATTCTGGTGACC GGTCCCACCGGTTCCGGTAAAACCACCAGCCTGTACGCTGGCCTGACGGAAATCAACGACCGTTCACGCAACATCATGAC CATCGAGGACCCGGTGGAATACCTGTTGCCGGGCATTGCCCAGACCCAGGTGAACACCAAGGCCGACATGACCTTCGTGC GCGGCTTGCGCGCCATTCTGCGTCAGGACCCGGACGTGGTGATGATTGGTGAAATCCGCGATGGCGAAACCGCCAGCATT GCGGTGCAGTCGTCGCTCACCGGTCACCTGGTGCTGTCTACACTGCACACCAATACCGCTATCGGCGCGGTGACCCGCTT GCTGGATATGGGGGTGGAAGCCTTTCTGTTGTCGTCCAGTCTGGACCTGGTGATGGCGCAACGATTGGTGCGACGTTTGT GTTCCTGTAAACAGCCGCACAAACCGACCCCGGCCGAGTGCGAGCAACTGGGCTTCCCGGCCGATGTGGAAATCTATTCC GCCAAAGGTTGCGAGAAATGCAGTTTTACCGGCTACAAAGGCCGGCTCGGCATCTACGAACACATCGTCATCGATGACCA CATGCGGCAACTGATCCATGAGGGCGCAGGCGAGCAAACCATGGTGGCCTACGCACGCAAGTTCAGCCCGTCCATCATGG ACGCGGGCAAGCAGCGCATATTGGCCGGCGAAACCAGTGTCGAAGAAGTGTTGCGCGTTACCACGCTCACCTAG Protein sequence : MSDLLPFSFAQTHGVLLDEGKLLHKPGLHHEVLAELQRCCAEPFELEEIAEADFKQRLKDVYHDDSDAAQQAVADMDLSQ LIDDIPEEGDLLAGNNDAPVIRLINAILAQAVKAKASDIHLEPCEDRVAVRFRVDGVLNEIMQAKPQLAPLINSRIKVMA RLDIAEKRLPQDGRMSVTLAGHTIDIRVSTLPSAYGERAVLRILDQAAGALKLHQLQMPEKTHKAFAGALQKPHGIILVT GPTGSGKTTSLYAGLTEINDRSRNIMTIEDPVEYLLPGIAQTQVNTKADMTFVRGLRAILRQDPDVVMIGEIRDGETASI AVQSSLTGHLVLSTLHTNTAIGAVTRLLDMGVEAFLLSSSLDLVMAQRLVRRLCSCKQPHKPTPAECEQLGFPADVEIYS AKGCEKCSFTGYKGRLGIYEHIVIDDHMRQLIHEGAGEQTMVAYARKFSPSIMDAGKQRILAGETSVEEVLRVTTLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-121 | 56 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-121 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M5M_12145 | YP_006917323.1 | general secretory pathway protein E | VFG0182 | Protein | 5e-128 | 59 |
| M5M_12145 | YP_006917323.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-122 | 57 |
| M5M_12145 | YP_006917323.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-122 | 55 |
| M5M_12145 | YP_006917323.1 | general secretory pathway protein E | VFG2426 | Protein | 6e-75 | 48 |
| M5M_12145 | YP_006917323.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-81 | 47 |
