Gene Information

Name : M5M_12125 (M5M_12125)
Accession : YP_006917322.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2684671 - 2685120 bp
Length : 450 bp
Strand : -
Note : COG2165 Type II secretory pathway, pseudopilin PulG

DNA sequence : 
ATGAAAAAACAATTGAGCCGCGGTTTTTCGCTGATTGAAATTATGGTGGTGCTGGTGATTCTGGGTCTGTTGATCAGTAT
CGTCGCGCCCAATGTACTGGACCGCGCCGACGGCGCCCGCGTGCAAAAAGTGTTTGCCGATTTCAAATCCATCGAAACCG
CATTGAAAACCTACCGCCTGGATAACTTCGGTTACCCCACCAGCGAGCAAGGCCTTGAGGCCCTGGTAGACAAGCCCTCG
CTGGACCCGGTGCCCAAGCGCTATCCGGCCAATGGTTATCTGGATTCACTGCCGAAAGATCCCTGGGGTAATGCCTACCT
CTACCTGAGCCCGGGCGAGAACGGTGAAATTGATATTTACACCCTGGGAGCCGATGGCGTGGCCGGCGGCGAAGGCCAGA
ATGCCGATATTGGCAACTGGATGAACCCGGCGGATCTCGAGCAAGAATAA

Protein sequence : 
MKKQLSRGFSLIEIMVVLVILGLLISIVAPNVLDRADGARVQKVFADFKSIETALKTYRLDNFGYPTSEQGLEALVDKPS
LDPVPKRYPANGYLDSLPKDPWGNAYLYLSPGENGEIDIYTLGADGVAGGEGQNADIGNWMNPADLEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 6e-25 56
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-25 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_12125 YP_006917322.1 general secretion pathway protein G VFG1871 Protein 3e-25 56
M5M_12125 YP_006917322.1 general secretion pathway protein G VFG2050 Protein 2e-25 56
M5M_12125 YP_006917322.1 general secretion pathway protein G VFG0180 Protein 1e-27 55