Gene Information

Name : M5M_11795 (M5M_11795)
Accession : YP_006917266.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2617094 - 2617828 bp
Length : 735 bp
Strand : -
Note : COG3279 Response regulator of the LytR/AlgR family

DNA sequence :
ATGGACGTGTTGATCGTAGACGATGAGCCCTTGGCCCGCGCGCGCTTGCGCCGGCTGCTGGAAGACCTGAAGGAATACAC
CGTGGTGGCTGAAGCCGAAGACTGCGAATCAGCCCTGGCGGCCATCGACGAGCACGACCCGGCCGTGGTGCTGCTGGATG
TGCGCATGCCGGGCGATGACGGCCTGGCCACCGCGCGTAAAATCGCGGAGATGGATTGCCCGCCCGCCATCGTCTTCTGC
ACGGCCTACGACCAGTACGCACTGGATGCCTTTGATACCGAAGCCGTGGGTTACCTGCTGAAACCGGTGCAGGCCGACGA
CCTGCGCAAGGTGCTGGACAAGGCCGGCAAGGTCAATAAATTGCAGCTGGCCAGCCTGCGGGAAGCGCCCGTGGCCGAAA
CCGGGCGCACCAATATCAGCGCCAAAACCCGGCGCGGGGTGGAGCTGATTCCGCTGGCCGACGTGCGCTTCTTCATCGCC
GATCAGAAGTATGTGACCGTGCATCATCTCGGTGGCGAAACCCTGATCGACGACACCCTGAAAGACCTTGAAACCGAACT
GGCTGGGCGCTTTGTGCGCGTACACCGCAACTCGCTGGTGTCCGTGGCGCACATTGAAGCCATGGAGCGCGCGCCCGACG
GCCAGTTCCGCCTGCGGTTAGAGGGCGTGGACACCAAGCCGGTGGTCAGCCGCCGGCACGTGCCGGAACTGAAGGAATTG
CTGGCCCGGCTGTGA

Protein sequence :
MDVLIVDDEPLARARLRRLLEDLKEYTVVAEAEDCESALAAIDEHDPAVVLLDVRMPGDDGLATARKIAEMDCPPAIVFC
TAYDQYALDAFDTEAVGYLLKPVQADDLRKVLDKAGKVNKLQLASLREAPVAETGRTNISAKTRRGVELIPLADVRFFIA
DQKYVTVHHLGGETLIDDTLKDLETELAGRFVRVHRNSLVSVAHIEAMERAPDGQFRLRLEGVDTKPVVSRRHVPELKEL
LARL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-49 47
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-49 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_11795 YP_006917266.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 8e-58 53