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Name : M5M_10360 (M5M_10360) Accession : YP_006916983.1 Strain : Simiduia agarivorans SA1 Genome accession: NC_018868 Putative virulence/resistance : Virulence Product : 50S ribosomal protein L16 Function : - COG functional category : - COG ID : - EC number : - Position : 2298968 - 2300266 bp Length : 1299 bp Strand : + Note : COG1593 TRAP-type C4-dicarboxylate transport system, large permease component DNA sequence : ATGGACATCTCTGTTTGGGTACTGCTGATCACCTTTGTGGTGCTGCTGTTTATCAACGTACCAATTTCCATTTGTATCGG CATGGCCACGCTGCTGACCATGTTGTTCACCATTGACGGCGGGCCTGCGATCACCACCATTGCCCAACGCATGGCCGGCG GCATAGAAAGTTTTGCCCTGTTGGCGATTCCGTTTTTTATCCTGAGCGGCATGTTGATGGGCCAGGGCGGCATTGCCCGC CGATTAATCAATTTTGCCAAAGTCATGATCGGCATGCTGCCCGGCGGCCTGGCCTATGTGAATATCGTATCCTGCGCCCT GTTCGGCGCCATTTCCGGTTCGGCCGTGGCCGCCACCAGCGCCATCGGCGGCTTCATGATTCCGGTCATGAATAAAGAAG GTTACGACAAAGACTTCAACGCAGCCGTTACCGTCGCCTCATCCACCTCCGGCCTGTTGATTCCACCCTCGAATATTCTG ATTGTGTATTCACTGGCTTCTGGCGGTGTATCCATTGCAGCCCTGTTTATTGCCGGCTATTTGCCCGGTATTTTACTGGC GCTGTCATTGATGGCCGTGTGCGGTATCTGGGCCAAGCGTAAAGGCTACCCGGTAGGCGAGCGCACCAGTCTGGGCGACA GTCTGCGTATCGCGCTCGACGCCATTCCCAGCCTGTTCCTGATTGTGCTGATCATTGGCGGTATTGTGGGCGGCATTTTC ACACCCACCGAGGCCAGCGCCATTGCCGTGCTGTACGCGTTGATACTGAGCGTGTTTATTTACCGCGAAGTGAGCCTGAA ACAGTTGCCGGACATTCTGGTGAAATCGGCGATTACCACCGCCATCGTCATGTTCCTCATCGGCACCAGCAGTGCCATGA GCTGGATTCTGTCTTACGAAAATATTCCGCAATCCATTTCCGCCGGCTTGTTGGAATTATCCAGCAATCCGATCGTAATT CTGCTCACCATCAACCTGATTTTGCTGGCCGTGGGGATCTTCATGGACATGACCCCGGCGGTGCTGATTTTCACGCCGAT CTTTTTGCCGGTGGCCAGCGAACTCGGCATGTCGCCGCTGCATTTCGGCATCATGATGGTACTGAACCTGTGCATTGGCT TGTGCACACCGCCGGTGGGCAGCGTGTTGTTTGTGGGCGCGAGTATTGCCAAAACCAGTATCACCCAATTGATCCGGCCG CTGTTGCCCATGTACCTGGCCATGTTCATCGTGCTGATGCTGGTGGCTTACATCCCGGCATTGTCTGAAGCGTTACCGCG TTTGTTCGGACTCTACTGA Protein sequence : MDISVWVLLITFVVLLFINVPISICIGMATLLTMLFTIDGGPAITTIAQRMAGGIESFALLAIPFFILSGMLMGQGGIAR RLINFAKVMIGMLPGGLAYVNIVSCALFGAISGSAVAATSAIGGFMIPVMNKEGYDKDFNAAVTVASSTSGLLIPPSNIL IVYSLASGGVSIAALFIAGYLPGILLALSLMAVCGIWAKRKGYPVGERTSLGDSLRIALDAIPSLFLIVLIIGGIVGGIF TPTEASAIAVLYALILSVFIYREVSLKQLPDILVKSAITTAIVMFLIGTSSAMSWILSYENIPQSISAGLLELSSNPIVI LLTINLILLAVGIFMDMTPAVLIFTPIFLPVASELGMSPLHFGIMMVLNLCIGLCTPPVGSVLFVGASIAKTSITQLIRP LLPMYLAMFIVLMLVAYIPALSEALPRLFGLY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-53 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-53 | 41 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-53 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M5M_10360 | YP_006916983.1 | 50S ribosomal protein L16 | VFG1110 | Protein | 1e-53 | 41 |
