Gene Information

Name : M5M_10220 (M5M_10220)
Accession : YP_006916955.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2255290 - 2256753 bp
Length : 1464 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGGCAGATCCCAAACCCCGCGCCCGCTCATTTGACGACGAAGACAAGGCCAGTCCCTCGCTGACCCTGCCGCACTCAAT
GGAAGCCGAGCAAGCGGTGTTGGGTGGCCTGATGCGCGATGCCAACCGCTTTGATGCGGTGGCCGAGCTGGTGAGCCCGG
ACGATTTCTTCCGCGACGATCACCGCCAGATTTTCACCATGATGCAGCGATTGATCGCCGCCGAGCAGCCCATTGATGCG
GTAACGCTGGTGGACGAGCTGGATCGCAACGGTGAACTGGAGCGGGTGGGCGGCCACGGTTATCTGCTGGATCTGGCGGC
CAATACGCCCTCGGCCGCCAACGTAGCGGCCTATGCCCGCATCATCCGCGAGCGCGCCACGCTGCGCGCGCTGATATCCG
CCGCTAACGAAATCAGCCAGACCTCCATGAATCCGGCCGGCCTGGATTCCGATGACCTGTTACAGCTGGCCGAGCGCCGG
GTCGCGGCCATTGCCGAAGACCGGCCCAAAGAAGGCGGTTTTATCGGTGCTGAATCCCTGTTGCATCAGGCAGTGTCGCG
CATTGATGAATTGTTCCGCACCGATTCAGACCTTACCGGGATTTCCACCGGCTTGCAGGACCTGAATGAGCGCACCGCCG
GCTGGCAGCCGGGTGAACTGATCATTCTCGCCGCGCGTCCGTCCATGGGTAAAACCGCACTGGCGCTGAACTTTGTGGAA
GCGGCGTTGGCCAGCACCAGCAAGCCGGCGCTGGTGTTCAGTATGGAAATGCCCTCGGTGTCGTTGATCATGCGTATGCT
GTCCAGCCTCGGCCGTATCGACGCGGGCAAATTGCGTAACGGCAAACTCACCGAAGAGGACTGGCCCAAGCTCTCCAGCG
CGGTGGCCAAGCTCAAAGATAAACCGCTCTACATCGACGACACGCCCGCGCTTTCGCCGCAGGAAGTGCGCGCGCGCATC
AAGCGCGTGGTGCGCCAACACTTTGGCAAGCTTCAGCAGGAAAACCCGGATACCCCGAGTGAAGAACTGGAAGCGCTGGC
GCAGCCGGGCATGGTGATGGTGGATTACCTGCAGCTGATGCAGATCGCCAACTACACCGAAGGCCGCACCCAGGAAATTT
CCGAAATTTCCCGCTCGCTCAAAGGCATTGCCAAAGAATTCAATTGCCCGGTGATTGCGCTGTCGCAGCTCAACCGCGGT
GTGGAGCAGCGCCCCAACAAACGCCCCATGAACTCCGACCTGCGGGAATCCGGTGCCATCGAGCAGGACGCCGATGTAAT
CCTGTTCATCTACCGCGACGAATATTACAACGAAGACAGCCCCGACAAAGGCGTGGCCGAACTGATTATCGGCAAACAGC
GTAACGGTGAAATCGGCACCAGCAAGGCCGCGTTTGTGGGCAAGTACACGCGCTTCGAGAATCTGGCACCAGACTACATG
GCCCAACCCGATTACGGCCCGTAG

Protein sequence :
MADPKPRARSFDDEDKASPSLTLPHSMEAEQAVLGGLMRDANRFDAVAELVSPDDFFRDDHRQIFTMMQRLIAAEQPIDA
VTLVDELDRNGELERVGGHGYLLDLAANTPSAANVAAYARIIRERATLRALISAANEISQTSMNPAGLDSDDLLQLAERR
VAAIAEDRPKEGGFIGAESLLHQAVSRIDELFRTDSDLTGISTGLQDLNERTAGWQPGELIILAARPSMGKTALALNFVE
AALASTSKPALVFSMEMPSVSLIMRMLSSLGRIDAGKLRNGKLTEEDWPKLSSAVAKLKDKPLYIDDTPALSPQEVRARI
KRVVRQHFGKLQQENPDTPSEELEALAQPGMVMVDYLQLMQIANYTEGRTQEISEISRSLKGIAKEFNCPVIALSQLNRG
VEQRPNKRPMNSDLRESGAIEQDADVILFIYRDEYYNEDSPDKGVAELIIGKQRNGEIGTSKAAFVGKYTRFENLAPDYM
AQPDYGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 5e-90 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-81 46
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-80 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-87 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-87 45
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-82 45
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-81 45
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-81 45