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Name : M5M_10220 (M5M_10220) Accession : YP_006916955.1 Strain : Simiduia agarivorans SA1 Genome accession: NC_018868 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 2255290 - 2256753 bp Length : 1464 bp Strand : - Note : COG0305 Replicative DNA helicase DNA sequence : ATGGCAGATCCCAAACCCCGCGCCCGCTCATTTGACGACGAAGACAAGGCCAGTCCCTCGCTGACCCTGCCGCACTCAAT GGAAGCCGAGCAAGCGGTGTTGGGTGGCCTGATGCGCGATGCCAACCGCTTTGATGCGGTGGCCGAGCTGGTGAGCCCGG ACGATTTCTTCCGCGACGATCACCGCCAGATTTTCACCATGATGCAGCGATTGATCGCCGCCGAGCAGCCCATTGATGCG GTAACGCTGGTGGACGAGCTGGATCGCAACGGTGAACTGGAGCGGGTGGGCGGCCACGGTTATCTGCTGGATCTGGCGGC CAATACGCCCTCGGCCGCCAACGTAGCGGCCTATGCCCGCATCATCCGCGAGCGCGCCACGCTGCGCGCGCTGATATCCG CCGCTAACGAAATCAGCCAGACCTCCATGAATCCGGCCGGCCTGGATTCCGATGACCTGTTACAGCTGGCCGAGCGCCGG GTCGCGGCCATTGCCGAAGACCGGCCCAAAGAAGGCGGTTTTATCGGTGCTGAATCCCTGTTGCATCAGGCAGTGTCGCG CATTGATGAATTGTTCCGCACCGATTCAGACCTTACCGGGATTTCCACCGGCTTGCAGGACCTGAATGAGCGCACCGCCG GCTGGCAGCCGGGTGAACTGATCATTCTCGCCGCGCGTCCGTCCATGGGTAAAACCGCACTGGCGCTGAACTTTGTGGAA GCGGCGTTGGCCAGCACCAGCAAGCCGGCGCTGGTGTTCAGTATGGAAATGCCCTCGGTGTCGTTGATCATGCGTATGCT GTCCAGCCTCGGCCGTATCGACGCGGGCAAATTGCGTAACGGCAAACTCACCGAAGAGGACTGGCCCAAGCTCTCCAGCG CGGTGGCCAAGCTCAAAGATAAACCGCTCTACATCGACGACACGCCCGCGCTTTCGCCGCAGGAAGTGCGCGCGCGCATC AAGCGCGTGGTGCGCCAACACTTTGGCAAGCTTCAGCAGGAAAACCCGGATACCCCGAGTGAAGAACTGGAAGCGCTGGC GCAGCCGGGCATGGTGATGGTGGATTACCTGCAGCTGATGCAGATCGCCAACTACACCGAAGGCCGCACCCAGGAAATTT CCGAAATTTCCCGCTCGCTCAAAGGCATTGCCAAAGAATTCAATTGCCCGGTGATTGCGCTGTCGCAGCTCAACCGCGGT GTGGAGCAGCGCCCCAACAAACGCCCCATGAACTCCGACCTGCGGGAATCCGGTGCCATCGAGCAGGACGCCGATGTAAT CCTGTTCATCTACCGCGACGAATATTACAACGAAGACAGCCCCGACAAAGGCGTGGCCGAACTGATTATCGGCAAACAGC GTAACGGTGAAATCGGCACCAGCAAGGCCGCGTTTGTGGGCAAGTACACGCGCTTCGAGAATCTGGCACCAGACTACATG GCCCAACCCGATTACGGCCCGTAG Protein sequence : MADPKPRARSFDDEDKASPSLTLPHSMEAEQAVLGGLMRDANRFDAVAELVSPDDFFRDDHRQIFTMMQRLIAAEQPIDA VTLVDELDRNGELERVGGHGYLLDLAANTPSAANVAAYARIIRERATLRALISAANEISQTSMNPAGLDSDDLLQLAERR VAAIAEDRPKEGGFIGAESLLHQAVSRIDELFRTDSDLTGISTGLQDLNERTAGWQPGELIILAARPSMGKTALALNFVE AALASTSKPALVFSMEMPSVSLIMRMLSSLGRIDAGKLRNGKLTEEDWPKLSSAVAKLKDKPLYIDDTPALSPQEVRARI KRVVRQHFGKLQQENPDTPSEELEALAQPGMVMVDYLQLMQIANYTEGRTQEISEISRSLKGIAKEFNCPVIALSQLNRG VEQRPNKRPMNSDLRESGAIEQDADVILFIYRDEYYNEDSPDKGVAELIIGKQRNGEIGTSKAAFVGKYTRFENLAPDYM AQPDYGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-90 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-81 | 46 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 1e-80 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-87 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-87 | 45 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 4e-82 | 45 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-81 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-81 | 45 |
