Gene Information

Name : M5M_09870 (M5M_09870)
Accession : YP_006916887.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2181236 - 2182330 bp
Length : 1095 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence :
ATGGCCCGCGCACTGCAGCTGGCAGAGCAGGGTATCTATAGCACTCGCCCCAATCCGCGCGTGGGCTGTGTGTTAGTGAA
TGAGGCCGGTGCGATCGTGGCTGAAGGCTGGCATCAGCGCGCCGGTCAGGGCCACGCCGAAGTGAACGCGCTGGCAGCGC
TGGGCGGCAGTGCCAAGGGCCTGATCGCTTACGTCACACTCGAACCCTGCAACCACACCGGGCGCACCGGACCCTGCTCC
CAGGCGCTGATCGACGCCGGCATCAGGCGCGTGGTATTCGGTATGCAGGATCCCAACCCCCGGGTGGCAGGCAGCGGACT
CGCGCGCCTGCGCGATGCCGGGGTGGAGGTACAGGGCCCGGTGCTGGAAGCCGGTTGCCGGGCGCTCAACCCGGGCTTTA
TCAAACGCATGGAACAGGGCCTGCCCTGGGTCCGGGTCAAGCTGGGCATGAGTCTGGATGGCCGTACCGCAATGGCCAGT
GGCGAATCCCAATGGATTACCGGGCCGGCTGCGCGCGCAGACGTCCAAAAACTGCGCGCGCGCAGCTGCGCTATCGTCAC
CGGTATCGATACCGTTTTGCACGATGATGCGGCCCTGACCTTGCGAGCGGGCGAGTTACAGCTGCCCGAGCCGCAATGCA
GCCTGGCGCTGGCCAATCCGCCTGTGCGGGTATTGCTTGACCGGCGTTCGCGCCTGCCCGCAGGCAGCCGGTTGTTGTCG
GCGGGTGGTCCTGTATTGCTGGTACAGGGCGAGCCTGAAACGTATGCCGATGCGGCCGTGCCCTACAGCCATTTGTCCCT
GCCCGAAGCGCAGAGTGATGGCGGCGATTTGCGCGCTTTGCTGGAGGCCCTGGCTGCGCGCGAGTGCAACGAAGTGCTGG
TCGAGGCGGGTAGCCGGTTGGCGGGCAGTTTTATGGCGGCGGGTCTGGTGGACGAATTGGTGCTGTACATGGCGCCGACC
CTGTTGGGCTCCAGTGCCAGGCCGTTGTTGCAACTGCCGCTTGAGCAGATGGCAGAACAACGCAAGCTGGCGATTACCGA
TATGCGCGCAATCGGTGGCGATTGGCGTATAACCGCCCACCCGGTGGGCGACTGA

Protein sequence :
MARALQLAEQGIYSTRPNPRVGCVLVNEAGAIVAEGWHQRAGQGHAEVNALAALGGSAKGLIAYVTLEPCNHTGRTGPCS
QALIDAGIRRVVFGMQDPNPRVAGSGLARLRDAGVEVQGPVLEAGCRALNPGFIKRMEQGLPWVRVKLGMSLDGRTAMAS
GESQWITGPAARADVQKLRARSCAIVTGIDTVLHDDAALTLRAGELQLPEPQCSLALANPPVRVLLDRRSRLPAGSRLLS
AGGPVLLVQGEPETYADAAVPYSHLSLPEAQSDGGDLRALLEALAARECNEVLVEAGSRLAGSFMAAGLVDELVLYMAPT
LLGSSARPLLQLPLEQMAEQRKLAITDMRAIGGDWRITAHPVGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 6e-55 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 6e-55 44