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Name : M5M_08620 (M5M_08620) Accession : YP_006916643.1 Strain : Simiduia agarivorans SA1 Genome accession: NC_018868 Putative virulence/resistance : Virulence Product : Type 4 fimbriae expression regulatory protein pilR Function : - COG functional category : - COG ID : - EC number : - Position : 1916358 - 1917701 bp Length : 1344 bp Strand : + Note : COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains DNA sequence : ATGAAAAAAACTGTCTTGCTGGTAGACGACGAACCCGACATTCTGGAGCTACTGGACATCACCTTGTCCCGCATGGGGTT GGATTGTCTTCGCGCGGAAAATATTGAATCAGCCCGCCAACAGCTCGTGAAACGCTCACCCGACCTTTGCCTCACAGATA TGAGGCTGCCGGACGGCAATGGATTAGACCTGGTCAAGCATATACAACAGCACTTCCAGAACACACCTATTGCTGTGATA ACAGCCCATGGGAATGTGGACATTGCCATTGAGTCGATGAAAGCAGGCGCCTTCGACTTCCTCAGCAAACCCATCGACCT GGAACGCTTACGAACATTGGTATCCACAGCGTTAAAGCTAGGTGAAGAAGCCGCCAGTAACGATGAGCTCATACTGGGAC AAACACCTGCTATCAGACATCTGAATACCCAAATCACCAAGCTCGCCCGCTCCCAGGCGCCTGTGCTGATTACCGGCGAG TCAGGCTCAGGAAAAGAACTAATTGCCCGCTCCATTCATCTGAAAGGCCCGCGCAATGCAGAGCCGTTCATCGCGGTAAA CTGTGGCGCCATCCCAAAAGACCTGATGGAAAGCGAGTTCTTTGGCCATAAAAAAGGCACGTTCACCGGCGCCACCGCAG ACAAGTTGGGAATGTTTCAGGCCGCCCAGGGTGGCACGCTATTCCTGGACGAAGTTGCAGATTTACCCTTGGATATGCAG GTCAAATTGCTCAGAGCGATACAGGAAAAAGCCGTCCGGCCGGTTGGCGCGCAGAAAGAAGAGGCCATTGACGTACGAAT CCTGAGCGCGACCCACAAAAATCTCCAACGCGAAGTTGAAAACGGAAACTTCAGGCAGGACCTGTACTACAGAATCAATG TCATCGAAGTGCAGTCACCTGCGCTTCGCGAGAGAGCGGAAGACCTGCCGCTACTCACCAACAAAATACTCCATAAAATA GCCAATACCCACGGAGCAAAAACAGCAAGAATCACCGAAAAAGCTTTGGAGAAGTTGAAGCACTACAGCTTCCCTGGCAA CGTCCGCGAACTGGAAAATATTCTGGAGCGCGCCTATACGCTATGTGAAAACGATACAATCGATATCAGCGACCTGCAGC TTTCTGAGCCGGAATCGACTACAGCCACCGACAATACACTGGCACCATCCACCCCAAGCATGCATGCGGGCACCTCTCTG GATACATACCTTGCAGACATAGAAAAAGAAGTGATAATCGACGCACTTGAGCGCTGCAAATGGAATCGGACACTAACGGC AAAGCAGCTCGGCATCAGTTTCCGATCGTTGCGTTATCGCCTCAAGAAATTGGGACTGGAGTAA Protein sequence : MKKTVLLVDDEPDILELLDITLSRMGLDCLRAENIESARQQLVKRSPDLCLTDMRLPDGNGLDLVKHIQQHFQNTPIAVI TAHGNVDIAIESMKAGAFDFLSKPIDLERLRTLVSTALKLGEEAASNDELILGQTPAIRHLNTQITKLARSQAPVLITGE SGSGKELIARSIHLKGPRNAEPFIAVNCGAIPKDLMESEFFGHKKGTFTGATADKLGMFQAAQGGTLFLDEVADLPLDMQ VKLLRAIQEKAVRPVGAQKEEAIDVRILSATHKNLQREVENGNFRQDLYYRINVIEVQSPALRERAEDLPLLTNKILHKI ANTHGAKTARITEKALEKLKHYSFPGNVRELENILERAYTLCENDTIDISDLQLSEPESTTATDNTLAPSTPSMHAGTSL DTYLADIEKEVIIDALERCKWNRTLTAKQLGISFRSLRYRLKKLGLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 2e-103 | 51 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 2e-103 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M5M_08620 | YP_006916643.1 | Type 4 fimbriae expression regulatory protein pilR | BAC0089 | Protein | 2e-71 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M5M_08620 | YP_006916643.1 | Type 4 fimbriae expression regulatory protein pilR | VFG1214 | Protein | 7e-131 | 62 |
| M5M_08620 | YP_006916643.1 | Type 4 fimbriae expression regulatory protein pilR | VFG0116 | Protein | 2e-61 | 41 |
