Gene Information

Name : M5M_07600 (M5M_07600)
Accession : YP_006916441.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Resistance
Product : D-alanyl-D-alanine dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1699726 - 1700427 bp
Length : 702 bp
Strand : -
Note : COG2173 D-alanyl-D-alanine dipeptidase

DNA sequence :
ATGGCCGAGCGCGCCGGGCTGAAGCCCGTAAAAACCGGGATCATTTTTTTACTGATTGCCATGGGCTTGAGTGGTTGTGC
CGACCAGCCGCCGGCGCCGGATTTTGTGGCCGTCTCTGGTGCAGGCATTCAGCTCGATATCAAATATTTTACCGGCGACA
ACCTGGTAGGGGAGCGGTTGGATGGTTACCTCGCCCCCAGCTGTTGGCTGGCCCGGCCGGCGGCTGAGGCGCTGCAGAAA
GTGGCGGCAGGATTGCGCGAGCGGGGCCTGGGGTTATTGATTTTTGACTGCTACCGGCCGCAAACCGCAGTGAATCATTT
TGTCCGCTGGGCTGCGAGCCCCGAGGATCTGACCACCAAACCGCTGTATTACCCGAACGAAGAAAAAGCGCTGCTATTTG
AACGCGGCTATATTGCCGAACGCAGTGGCCACAGCCGTGGTGCCACCGTGGACCTGAGTGTGTACCGTCTGGCCGATGGC
AAAGCGCTCGATATGGGCACCGGTTTTGATTTTATGGATGTGAGCTCTGCCACCGCTTATGAACCCGTGAGTGAGACGGT
GCGCGCCAATCGCGACCTGCTGCTGGCGGCCATGACGGCCCAGGGGTTTGTGAATTATTCGCAGGAGTGGTGGCATTACA
CCTTCAAGCCCGAGCCTTACCCCGATACCTACTTTTCCCAACCCGTGAGTGCTGCACCATGA

Protein sequence :
MAERAGLKPVKTGIIFLLIAMGLSGCADQPPAPDFVAVSGAGIQLDIKYFTGDNLVGERLDGYLAPSCWLARPAAEALQK
VAAGLRERGLGLLIFDCYRPQTAVNHFVRWAASPEDLTTKPLYYPNEEKALLFERGYIAERSGHSRGATVDLSVYRLADG
KALDMGTGFDFMDVSSATAYEPVSETVRANRDLLLAAMTAQGFVNYSQEWWHYTFKPEPYPDTYFSQPVSAAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 6e-30 44
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase AF130997.1.orf5.gene Protein 6e-30 45
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase U35369.1.gene7.p01 Protein 1e-30 44
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase AE016830.1.gene2249. Protein 9e-31 44
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase AF310956.2.orf6.gene Protein 2e-30 44
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase U82965.2.orf32.gene. Protein 2e-30 44
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase NC_005054.2598281.p0 Protein 2e-30 43
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase M97297.gene.p01 Protein 2e-30 43
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase NC_014475.1.orf4.gen Protein 2e-30 43
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase FJ349556.1.orf5.gene Protein 5e-29 43
M5M_07600 YP_006916441.1 D-alanyl-D-alanine dipeptidase AF155139.2.orf6.gene Protein 2e-30 43