Gene Information

Name : M5M_04835 (M5M_04835)
Accession : YP_006915904.1
Strain : Simiduia agarivorans SA1
Genome accession: NC_018868
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1074568 - 1075065 bp
Length : 498 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence : 
ATGGCGACTGTAACAATGAAGGGTAACCCCGTTGAAACTGTGGGTAATCTGCCTGCGGTTGGCACCCAGGCACCGGCTTT
CACGCTGGCCGCGGCAGATTTATCTGACCTCACACTGGCATCCCTCACGGGCAAGCGGGTGGTGTTGAATATCTTCCCGT
CCATCGACACCCCAACGTGCGCCACATCGGTACGTGAGTTCAATCAGCGTGCGGCCGGGTTGGACAATGTGGTGGTGGTT
TGTGTGGCAGCTGACTTACCTTTTGCCATGGCGCGGTTTTGCGGCGCCGAAGGCATTTCCAACGTGAAAACCGGGTCCAG
TTTCCGTTCCAGTTTTGGTCAGGATTATGGTGTGGCGTTTGCCGGAGGCCCGCTGGCGCAGCTGTTATCACGGGCTGTTG
TGGTGATTGGCACCGATGGCAAGGTGATTTACACCGAGCAGGTGGCGGAAGTGGCCAGTGAGCCCGATTACGATGCCGCG
CTGAAAGCGCTGGCCTGA

Protein sequence : 
MATVTMKGNPVETVGNLPAVGTQAPAFTLAAADLSDLTLASLTGKRVVLNIFPSIDTPTCATSVREFNQRAAGLDNVVVV
CVAADLPFAMARFCGAEGISNVKTGSSFRSSFGQDYGVAFAGGPLAQLLSRAVVVIGTDGKVIYTEQVAEVASEPDYDAA
LKALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-27 45
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 2e-27 45
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-28 45
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-27 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M5M_04835 YP_006915904.1 peroxiredoxin VFG0087 Protein 4e-28 45