Gene Information

Name : DCF50_p659 (DCF50_p659)
Accession : YP_006912651.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 667781 - 670333 bp
Length : 2553 bp
Strand : +
Note : -

DNA sequence :
ATGAATACACCCATGCTGCAGCAATATCAAAAGATAAAGAACAGGGTACCGGATACGATCCTGTTTTTCAGGCTTGGCGA
TTTTTATGAAATGTTTGGCCAGGATGCCGAGACCGCTGCTCCAGTTCTGGAAATTGTGCTAACGGCACGGGACGCAGGCA
AGGGCCAGAAAATACCCATGTGCGGAGTTCCGCATCATGCGGTGGACGGTTATCTTCTGAAATTGGTCGCTGCTGGATTT
AAAGTTGCCATTTGTGAACAAATGGAAGATCCTCAAGCCAGTAAAGGGATTGTCAAAAGAGATATTGTCCGGATTGTGAC
GCCGGGTACGCTGGACAATATCAGTTCGGAAACAAAGAACAACTATTTAGCGTGTGTCTATAAGGAGAAAACGTGGGCGC
TCGCTTATCTCGACATCACAACGGGTGATTTCCGGATCATGGAAACGCCGTCCATTCAAATACTGCAGGCAGAATTAAAC
CGTATTGCACCCTCAGAACTTATCCTGCCCAAGGACATTGCGATGCTGTCCAAGCTATTTACGGATTATTATCTGACAGC
GATCGAAAAAAATTTGTTCCTGAGGACGGCTGAACTTCGTGAAAGATTTAAGGAGCAGGCAGAGCTTTTGCAGCAAATGC
CGGTTGCCTGTAAAGCTGCCGCCGGACTCTGGCAGTATATCAGTCAGAATATCCCCAACTCGGGACAGGAACATATCCTG
CGCATTTCAGTGAGCCAAAGCAGCACGGCAATGGTTCTCGACAAATGGACCAGAAGAAATCTTGAGCTTGTTGAATCACT
GCGGACCAGCGATGAGAAGGGGACCTTATTTTCCACCCTGAATTTAACCAAAACGGCCTTTGGTGCTAGACTGCTCAGAA
ATTGGGTGCAGCAACCCTTACGCGATCCTGAAAGCATTAATGAACGGCTGGCTTCCGTCGAAGAGTTAACACGGAATACT
TTTTTACGCCAAGATATACAAAAAGCTTTGACAACAGTGTATGACCTGGAAAGGCTGCTTGGAAAGCTGTCCCTCGGCAA
AGCAAGTCCCCGGGATCTGCTGGCGCTGGGCAGCACGTTATCCTGCCTGCCCAAGGTCAGAGATTGCATCACTGACAACG
ATTCTCAAAAATTGGCTAAATATCTGCCGTCCCTGGCAGGACTTGATGACCTTGCGCAGGAACTGCTTGCGGCCATAAAC
CCTGAAGCACCGTACTCACCGAAAGATGGAAATATTATTCAGAACGGCTATTCCGCAGAAATTGATAGTTTAAGGGCGAT
ATCGTCCGGTGGCAAAGAATGGATTGCCCGCCTCGAAAACCAGGAAAGAGAACGCACCAAAATCCGTTCGTTGAAGATCG
GCTTTAATAAGAACTTTGGGTACTTTATTGAAATCACCAATGCGAATGCTCATTTGATTCCGGATGATTATCAGCGAAAA
CAGACGCTGGTTAATGCCGAGCGATTCATCACCCCGGAATTAAAGGAATACGAGCAGCGCGTCCTGACTGCGCAGGACAA
ACTCAGCGATCTCGAATATCAGCTGTTTTCTGTGCTTCGGGACAAGGTTCTAGCTTGTTCGCTGCTGATCATTAACGCGG
CCCAGTCGCTGGCCGAAATCGATGTTTTTGTATCCTTGGCCGGAACCGCTATTCAGAACAATTATGTCAAACCGGAAATA
CGTTCCGATGGGATCATTCATATTGTTGAGGGACGGCATCCGGTTGTGGAAAGAATCTGTGATACGTTTGTTCCGAATGA
TACCTATCTTACCCGTAATAAACACCTTGCACTGATTACCGGCCCCAATATGGCCGGGAAATCGACCTATATGCGCCAGG
TAGCACTGATCGTTTTAATGGCCCAGATCGGCAGCTTCGTGCCGGCTCAGAAGGCCGCCATTTCGATCGCCGACTGTATT
TTTACCCGGGTAGGAGCCGCCGATAACCTGGCAGCAGGGCAAAGTACATTTATGGTCGAAATGAACGAAGTCGCCCATAT
CCTCAAAAATGCCACGGCGGACAGTCTGATTATTCTGGACGAAGTCGGTAGGGGAACAGCCACGTTTGACGGTCTCAGTC
TGGCCTGGGCCATTGCCGAATATCTGGTTGAAAACACCAACATTAAAGCCAAAACATTATTTGCGACACATTACCACGAG
CTAACCGAATTAGAAGAACGTTATCCTGAAGTTTTTAATCTGCATGTGGCTGTTAGGGAACAGGGGGACGATGTTGTTTT
CCTGCATAAAATACTTCCCGGCAAAGCTGACCGGAGCTATGGCCTTCATGTGGCGAAAATTGCCGGCCTTCCGCCTCATC
TCTTAAAAAGGGCGGCTATCATTCTCGGTGAGCTCGAAAATTCCCCGACCCAGCGCAAGATAGTGAAAGCTGTTGACGCC
AATATGCTGCAGCCATCACTGTTTGATACCCAGAGCACGCATCCGATCTTCAAGGAGCTTGAAGAACTCGATCTGGATAA
TCTTGCACCGCGTCAGGCGATGGATTACCTCTATGATCTGGTCAGCCGCGTTAAGGCGACCAAGATTATTTAA

Protein sequence :
MNTPMLQQYQKIKNRVPDTILFFRLGDFYEMFGQDAETAAPVLEIVLTARDAGKGQKIPMCGVPHHAVDGYLLKLVAAGF
KVAICEQMEDPQASKGIVKRDIVRIVTPGTLDNISSETKNNYLACVYKEKTWALAYLDITTGDFRIMETPSIQILQAELN
RIAPSELILPKDIAMLSKLFTDYYLTAIEKNLFLRTAELRERFKEQAELLQQMPVACKAAAGLWQYISQNIPNSGQEHIL
RISVSQSSTAMVLDKWTRRNLELVESLRTSDEKGTLFSTLNLTKTAFGARLLRNWVQQPLRDPESINERLASVEELTRNT
FLRQDIQKALTTVYDLERLLGKLSLGKASPRDLLALGSTLSCLPKVRDCITDNDSQKLAKYLPSLAGLDDLAQELLAAIN
PEAPYSPKDGNIIQNGYSAEIDSLRAISSGGKEWIARLENQERERTKIRSLKIGFNKNFGYFIEITNANAHLIPDDYQRK
QTLVNAERFITPELKEYEQRVLTAQDKLSDLEYQLFSVLRDKVLACSLLIINAAQSLAEIDVFVSLAGTAIQNNYVKPEI
RSDGIIHIVEGRHPVVERICDTFVPNDTYLTRNKHLALITGPNMAGKSTYMRQVALIVLMAQIGSFVPAQKAAISIADCI
FTRVGAADNLAAGQSTFMVEMNEVAHILKNATADSLIILDEVGRGTATFDGLSLAWAIAEYLVENTNIKAKTLFATHYHE
LTELEERYPEVFNLHVAVREQGDDVVFLHKILPGKADRSYGLHVAKIAGLPPHLLKRAAIILGELENSPTQRKIVKAVDA
NMLQPSLFDTQSTHPIFKELEELDLDNLAPRQAMDYLYDLVSRVKATKII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 3e-137 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p659 YP_006912651.1 DNA mismatch repair protein MutS VFG0562 Protein 4e-149 43