Gene Information

Name : DCF50_p2822 (DCF50_p2822)
Accession : YP_006914810.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : tmRNA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2919265 - 2919729 bp
Length : 465 bp
Strand : -
Note : -

DNA sequence :
TTGGCTGAGGGAATTAAGGTCATCGCTGAAAACAGAAAAGCCAGGCACGATTTCTTTGTCGAGGACAGTTATGAAGCCGG
GATCATCTTAACGGGGACCGAGATAAAGTCAATCCGGGCCGGCCGTGTGAATCTCAAAGACAGTTATGCTGAGATTATCA
AGGGTGAGGTTTGGCTAAATCAGATGCATATCAGCCCGTATGAACAAGGGAACAGGTTCAACCATGATCCGCTGCGGAAG
AGAAAACTGCTGCTTAATCGCACCGAGATTATTAAGATGGGGGATAAGGTCAAGCTACAGGGAATGACCCTTGTCCCGTT
AAAGATTTATCTCAAGCACGGCATGGCCAAAATTGAACTTGGGCTGTGCAAAGGCAAAAAAACTTATGACAAGCGGGATG
ATCTGGCCGAGCGGGATGCCAAAAGGCAAATGGAACGGGATTTAAGAGACAGAAACAAGGGTTAG

Protein sequence :
MAEGIKVIAENRKARHDFFVEDSYEAGIILTGTEIKSIRAGRVNLKDSYAEIIKGEVWLNQMHISPYEQGNRFNHDPLRK
RKLLLNRTEIIKMGDKVKLQGMTLVPLKIYLKHGMAKIELGLCKGKKTYDKRDDLAERDAKRQMERDLRDRNKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 2e-41 63
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 4e-32 50
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-24 42