Gene Information

Name : DCF50_p2676 (DCF50_p2676)
Accession : YP_006914664.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2751241 - 2751966 bp
Length : 726 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGAAATTAATAATGCGATCAAAAAATACTATGTTGGAATGCCAAATGAACTGACTATTTTGAAAAATATCAATTT
GAATATCAAGGAAGGTGAATTTGTCTCCATCGTAGGGGCTTCTGGTTCCGGCAAAAGTACCCTGATGAATATTATCGGAG
CTTTGGACCGTCCAACCTCAGGAACCTATACCCTTGACGGGATATCCATTGAGGATATGAGCCAAAATGAATTGTCAGAA
ATTCGCAATAAGAAAATAGGCTTTGTTTTTCAGACGTTTAATTTGATTCCCAGATCTACGGCTTTAAGCAATGTTGAATT
GCCACTGTTTTATCTGGGGATCCATAAAGAAGAAAGAAGAAAAAAAGCCGTGGAGTTACTAGAACTTGTAGGAATGGGAG
ACCGGATGACACATATGCCCAATGAGCTTTCGGGGGGGCAAAAGCAAAGGGTTGCCATTGCCAGAGCTTTAGCTAACGAT
CCGGCAATCATTTTAGCAGATGAACCGACAGGTGCCCTAGATACCCAGACGGGGAAAATGGTGATGGATATTTTTTTGAA
AATCCACCGTGAGGAACATAAAACAATTATTTTGATTACCCATAACCCTGAATTGGCCGAAGAGGCAGAACGGCAGATTA
CGCTGAGTGATGGTATGATTACCGGAGATTTCTATAACAGCGATATTTCCCGCCTAAAGTGTGAAGCAATGGGGGTGAAG
GCATGA

Protein sequence : 
MIEINNAIKKYYVGMPNELTILKNINLNIKEGEFVSIVGASGSGKSTLMNIIGALDRPTSGTYTLDGISIEDMSQNELSE
IRNKKIGFVFQTFNLIPRSTALSNVELPLFYLGIHKEERRKKAVELLELVGMGDRMTHMPNELSGGQKQRVAIARALAND
PAIILADEPTGALDTQTGKMVMDIFLKIHREEHKTIILITHNPELAEEAERQITLSDGMITGDFYNSDISRLKCEAMGVK
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-56 56
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 5e-39 46
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-38 44
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 7e-41 43
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 3e-34 42
DCF50_p2676 YP_006914664.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 5e-28 41