Name : DCF50_p2045 (DCF50_p2045) Accession : YP_006914033.1 Strain : Dehalobacter sp. CF Genome accession: NC_018867 Putative virulence/resistance : Virulence Product : Type IV fimbrial assembly, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 2096374 - 2098053 bp Length : 1680 bp Strand : + Note : - DNA sequence : ATGCCGGAAACGATGCGGAAATTGGGACAGCTTTTAGTTGAATCAGAGGTGATTACTACTAAGCAGCTCGAAGATGCCTT GGAGATGCAGTCCAAAACCTCTAAAAAACTGGGCGAGATCCTGATTGAAATGAAATCCATTACAGAAAAACAGCTACTCA GAGTACTGGAATTTCAATATCATATTCCATACTATGATCTAGGTGAAACTCCGATTGATCCTCTTGCTACGGGACTGATT ACAGAAGGAATGGTCAGAAAGCATTCCTTGATACCGATCAAGAAGGAAAATAATGTGCTGATCGTTGCCATGGTCGACCC GCTGGACTTTTATGCGATCGATGATGTCAAACGGGCCACCCGTCTTGACATTAAGCCTGCCATGGCTACCGCGTCGGATA TCATGAATGCGATCGAGCGCTATTATGGCAAGGAAAGCGCTGAAAAAGCGATTGAAGAACTGAAACAAACGTATGACCTT GTTGACTTTTCGGGAATTGACGATCAGTTTGGCGATGAGGTGACGAATGCCCCTGTCGTAAGACTGGTTAATTCCGTGAT TCAGCACGCGATCAAGACCAATGCCAGTGACATTCATATTGAACCGTCTGACAATGAAATGCGGATCCGCTACCGGATAG ACGGAGAACTTCAGGAAGCCATGAAAACATCTAAAGCGGCTCACCAGGCCATCGTCACCAGAATTAAGATCATGGGGCAA ATGGATATTGCTGAGAAGCGCCTGCCCCAGGATGGCAGAATCGAAGTCAGCATTGACGGCAATAACGTCGACCTCAGGCT TTCCATACTTCCGACTGTCCACGGAGAAAAGATTGTTATCCGCGTGCTTGGAATGAGAAACAGTACATATACCAAATCTG AGCTGGGCTTTACTGCTGAAAATCTTGAGCTGTTTGACCGGATTATTAAAAGTCCGAATGGGATCATCCTTGTTTCCGGC CCCACCGGTTCCGGAAAAACGACGACACTTTACGCAGTCATGCGGGAATTGAATAAACCAACTGCCAATATCATCACCGT AGAAGACCCTGTTGAATACCGGATGGATGGGATTAATCAGGTTCAAGTCAATACCAAAGCCGGCCTGACTTTTGCCTCAG GACTGCGGTCGATTTTGCGTCAGGACCCCGACATTATCATGATTGGGGAGATCCGTGATTCGGAGACAGCCCAGATTGCG ATCCGTTCAGCCATCACCGGCCACCTGGTCTTAAGCACTATCCACACCAACGACGCAGCTTCCTCGATCCTCCGGCTTGT CGATATGGGAATTGAATCTTATCTTGTTTCTTCCGCTGTTGTCGGCCTGATGGCACAGAGACTTGTCCGTAAAATATGCA CGAAATGCAAAACTTCATACCGACCGGAACATGCGGAAATGATGCTGCTGAAACTGCGAGAACCCCAGCCGCTATACAAA GGGACTGGATGTCCTGCCTGTAATTACACAGGCTATCACGGCAGAACTGCCATCCATGAAATCATTCCGATCAACAAGGA TATCCGCGAGATGGTTAACCGGGGTGTAACTCCTGATCAAATAAGACATATTGCCGGCCGCTTTGGCTATATTTCGCTTC GTGATACCTGTACCCGTCTGGTTCTGGACGGAACCACCACCACGGAAGAATTATTAAAAGTAACCTATAGTATTGAATAG Protein sequence : MPETMRKLGQLLVESEVITTKQLEDALEMQSKTSKKLGEILIEMKSITEKQLLRVLEFQYHIPYYDLGETPIDPLATGLI TEGMVRKHSLIPIKKENNVLIVAMVDPLDFYAIDDVKRATRLDIKPAMATASDIMNAIERYYGKESAEKAIEELKQTYDL VDFSGIDDQFGDEVTNAPVVRLVNSVIQHAIKTNASDIHIEPSDNEMRIRYRIDGELQEAMKTSKAAHQAIVTRIKIMGQ MDIAEKRLPQDGRIEVSIDGNNVDLRLSILPTVHGEKIVIRVLGMRNSTYTKSELGFTAENLELFDRIIKSPNGIILVSG PTGSGKTTTLYAVMRELNKPTANIITVEDPVEYRMDGINQVQVNTKAGLTFASGLRSILRQDPDIIMIGEIRDSETAQIA IRSAITGHLVLSTIHTNDAASSILRLVDMGIESYLVSSAVVGLMAQRLVRKICTKCKTSYRPEHAEMMLLKLREPQPLYK GTGCPACNYTGYHGRTAIHEIIPINKDIREMVNRGVTPDQIRHIAGRFGYISLRDTCTRLVLDGTTTTEELLKVTYSIE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-93 | 41 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-93 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
DCF50_p2045 | YP_006914033.1 | Type IV fimbrial assembly, ATPase PilB | VFG1876 | Protein | 5e-90 | 45 |
DCF50_p2045 | YP_006914033.1 | Type IV fimbrial assembly, ATPase PilB | VFG0182 | Protein | 4e-95 | 43 |
DCF50_p2045 | YP_006914033.1 | Type IV fimbrial assembly, ATPase PilB | VFG2048 | Protein | 2e-94 | 41 |