Gene Information

Name : DCF50_p1971 (DCF50_p1971)
Accession : YP_006913958.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : transposase (05)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2016990 - 2017274 bp
Length : 285 bp
Strand : -
Note : -

DNA sequence : 
ATGACCAAAAGAGAACGAAGATCTTTTACCGATGAATTCAAGAATCAAATGGTTCAGTTATATCTGAACGGCAAACCGAG
AGCCGAAATTCTGAAGGAATATGATATAGGTGGTTCAACCTTTGACAGATGGACGAAACAACATGAGAAAACAGGTTCAT
TTCGTGAAAAAGATAATCTTAGTGATGAACAGAAAGAACTCATAAAACTTCGCAAAGAAAACCAGCGCTTGTTGATGGAA
AATGATATTTTAAAGCAAGCCGCGCTGATCATGGGACGAAAGTAG

Protein sequence : 
MTKRERRSFTDEFKNQMVQLYLNGKPRAEILKEYDIGGSTFDRWTKQHEKTGSFREKDNLSDEQKELIKLRKENQRLLME
NDILKQAALIMGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC67553.1 hypothetical protein Not tested Type-IVc SCCmec Protein 1e-25 68
SAR0081 YP_039548.1 transposase Not tested Type-II SCCmec Protein 1e-25 68
SAR0416 YP_039869.1 transposase Not tested vSa¥á Protein 3e-22 61
SACOL0464 YP_185354.1 IS3 family transposase Not tested vSa¥á Protein 1e-18 55
tnp YP_001331418.1 transposase Not tested vSa¥á Protein 1e-18 55
SAV0418 NP_370942.1 transposase Not tested vSa¥á Protein 8e-19 53
SA0379 NP_373628.1 transposase Not tested vSa¥á Protein 8e-19 53
l7045 CAD33744.1 - Not tested PAI I 536 Protein 7e-08 42
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 7e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p1971 YP_006913958.1 transposase (05) VFG1485 Protein 3e-08 42