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Name : DCF50_p1932 (DCF50_p1932) Accession : YP_006913919.1 Strain : Dehalobacter sp. CF Genome accession: NC_018867 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB Function : - COG functional category : - COG ID : - EC number : - Position : 1961589 - 1964072 bp Length : 2484 bp Strand : - Note : - DNA sequence : ATGTCAAGAAAATTTACGCAAAAGGCAGAAAAAGTATTTATGCTTGCTGAGGCGATTGCCAAACGCATGGGCCATAAGAT TATAGGGACTGAGCATTTTCTTTTGGCTTTGATTGAAGAAGGAGAAGGAGTTGCCGCGAAGGCGCTGACCGGGATTGGAT TGGATCCTGACAAGGTAAGCGCAAAGATTACCCAGATCATTGGCGTAGGAACCCCTATCAGCGGAGAGGTCGGATTGTCT CCGCGAGTGAAGCGCGTGATTCAGCTTGCCACCGAAGAGGCTCAACGCCAGGGGGTCAATTATATCGGAACCGAGCACAT TCTGCTTGGCCTGATCATTGAGGGAGAAGGAATTGCTGCGAGAGTCCTGGCGGATCTTAAGATCAGTCCGGAAAAAATAT GGGAGCAGGTTGTAGAGCTCCTGGGAGGAGAAACCGAAGGCACATCAATGCCCGGAAGTTCCGCCGCGAATAACAGCAAA CCCGGACAGGCAGGTGGAACACCGACTTTAAACGAGTTCGGACGGGACTTGACGGTTATGGCCGCTGAAGGGAAGCTTGA CCCCGTCGTCGGCCGGGGAAATGAGATTGAAAGAGTCATTCAGGTACTGAGCCGCCGGACGAAGAATAACCCTGTATTGA TTGGAGAACCCGGGGTCGGAAAAACGGCCATCGCCGAGGGTTTGGCCCAAAGGATTGTTAACAACCAAGTGCCGGAGATA CTTGTCGATAAACGGGTTGTGACACTCGATCTTTCTTCGATGGTAGCAGGGACAAAATATCGTGGTGAATTTGAAGAGAG AATGAAAAAAGTCATGGAAGAAATCCGGCTGGCGGGCAACGTGGTCGTCTTCATCGACGAACTTCATACCCTGATCGGAG CGGGGGCTGCCGAAGGAGCCATTGACGCAGCCAATATTCTGAAACCGGCCCTGGCCAGAGGAGAAATGCAATGTATCGGA GCAACGACGCTCGATGAATACCGTAAGCATATTGAACGTGATCCAGCCTTGGAAAGACGTTTTCAACCGATTAAGGTAGG AGAGCCTACAGTTGAGGAAACCGTGGCCATTCTGAAGGGCTTAAGGGACAAGTATGAAGCCCATCACAGGGTGAAGATAT CCGATGAGGCGATTGATGTGGCAGCGCGCTTGTCCGACAGGTATATTTCCGACAGATTTTTGCCCGATAAAGCCATCGAT TTAATTGATGAGGCTGCATCCAGAGTTCGCATTCACAGTTTTACGGCACCGTCGGATTTGAAAGAGCTGGAGGAAGAAAT CGAAAATCTGAAGAAAGAAAAAGAAGCAGCCGTAAAAAGGCAGGAATTCGAAAAAGCCGCCGAAATCAGAGACGAAGAGC AAAAGAAACGCGAAAAGCTCAGCGAGATTCGTAAGAACTGGGAGGAAAGCCGAGAAAAGGACCGGATGGTCGTGGGGCCA GAGGATATCTCCGGAATCGTATCGAGCTGGACAGGAGTCCCAGTGAATAAACTTGAAGAAGGAGAAAGCTTCAGACTTTT GAAACTGGAATCCCTTCTGCATGAGAGCGTGATCGGACAGGATGAGGCGGTCACGGCTGTTGCCCGTTCGATCAGACGGG CCAGGGCGGGACTCAAAGACCCTAAGCGGCCCATTGGTTCGTTTATCTTCCTCGGACCGACAGGAGTCGGAAAAACCCAG CTGGCGAGGTCCTTGGCTGAATCTCTGTTTGGGGATGAAAATTCGCTGATCAGAGTTGATATGTCCGAATATATGGAAAA GCATGCCGTATCCAGGATGGTAGGTTCGCCTCCGGGATATGTCGGTCATGATGAAGGTGGTCAGCTTACGGAGGCGGTCC GCAGGAAACCATACAGCGTCATTCTGTTTGACGAAATAGAGAAGGCCCATCCTGAAGTGTTTAATATTCTGCTGCAGGTA CTGGAAGACGGCAGGCTCACGGACTCTAAGGGAAGGCTTGTGGATTTTCGCAACTGCGTATTGATTATGACGTCCAACGT CGGAGCTTCTTTCCTAAAAAAAGAATCTCTGGGTTTTGTCTCCGGAAGAAGCGAAGAAAGCGAATATAAATCCATGAGTT CCAGGATCATGGAGGAACTTAAGAAGACTTTTCGTCCGGAATTTTTGAACAGAGTGGATGAAATGGTGGTATTCCATCCG CTCAAGCAAGACGATCTTGTGAAGATTACCAAAATCCTGATCAAGGATGTCAGCAAACGACTAAAAGAGCAGGAACTTGA ACTGGTCCTGGATGATGAGGTTCTGGAGCATCTGGCAGAAGAGGGTAATGATCCGACTTATGGGGCGCGTCCTTTACGGA GGGCCATCCAAAAAATGATTGAGGATCCCCTGTCTGAAAAGATTCTTGAAGGAACTTATAACGCAGGCGATACGATTAAG GTCGAACTTTCCGACAAAGAAGTCGTTTTTGTGAAACCCGCTGCCGTCAAGAAAAAGGGCAGAAAGAAACTGGAAAAGGT CTAA Protein sequence : MSRKFTQKAEKVFMLAEAIAKRMGHKIIGTEHFLLALIEEGEGVAAKALTGIGLDPDKVSAKITQIIGVGTPISGEVGLS PRVKRVIQLATEEAQRQGVNYIGTEHILLGLIIEGEGIAARVLADLKISPEKIWEQVVELLGGETEGTSMPGSSAANNSK PGQAGGTPTLNEFGRDLTVMAAEGKLDPVVGRGNEIERVIQVLSRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNNQVPEI LVDKRVVTLDLSSMVAGTKYRGEFEERMKKVMEEIRLAGNVVVFIDELHTLIGAGAAEGAIDAANILKPALARGEMQCIG ATTLDEYRKHIERDPALERRFQPIKVGEPTVEETVAILKGLRDKYEAHHRVKISDEAIDVAARLSDRYISDRFLPDKAID LIDEAASRVRIHSFTAPSDLKELEEEIENLKKEKEAAVKRQEFEKAAEIRDEEQKKREKLSEIRKNWEESREKDRMVVGP EDISGIVSSWTGVPVNKLEEGESFRLLKLESLLHESVIGQDEAVTAVARSIRRARAGLKDPKRPIGSFIFLGPTGVGKTQ LARSLAESLFGDENSLIRVDMSEYMEKHAVSRMVGSPPGYVGHDEGGQLTEAVRRKPYSVILFDEIEKAHPEVFNILLQV LEDGRLTDSKGRLVDFRNCVLIMTSNVGASFLKKESLGFVSGRSEESEYKSMSSRIMEELKKTFRPEFLNRVDEMVVFHP LKQDDLVKITKILIKDVSKRLKEQELELVLDDEVLEHLAEEGNDPTYGARPLRRAIQKMIEDPLSEKILEGTYNAGDTIK VELSDKEVVFVKPAAVKKKGRKKLEKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DCF50_p1932 | YP_006913919.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB | VFG0079 | Protein | 0.0 | 62 |
| DCF50_p1932 | YP_006913919.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative regulator of genetic competence clcC/mecB | VFG0080 | Protein | 4e-143 | 50 |
