Gene Information

Name : DCF50_p1862 (DCF50_p1862)
Accession : YP_006913849.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1904253 - 1904951 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAATTTTGATTATTGAAGACGATCTGAATATTGCGGAACTGCAACAAGATTACCTGGAAGTGGAAGGTTTTGC
AGCCGATATTTGTGCGGATGGTTCTGCCGGTCTGAAGCAGTTCCAGGAAAACGGCTATGATCTCCTAATCCTTGATATCA
TGCTCCCGGGTCTGGATGGTTTGGAGATTCTGCGTAGTCTAAGAGATGAAAAAGAGGTTCCTGTGATTCTGGTATCCGCT
AAAAAAGAGGAAATCGACAAAATCAAAGGCTTTAATCTCGGAGCGGATGATTATATCACGAAACCTTTCAGCCCGGGTGA
ACTCGTCGCCAGGGTCAAAGCTCATCTGCAGAATTATGAAAAACTGAAGAAGAAATTCAGCGAAAAGCAGATAAGGAACA
ACGCTGTTGTGATTCGTGGACTCAGGATCGAGAAAGAAGCCCGCAGAGTCTATATCCATGACAAGGAAGCCAATCTCGCC
CAGAAAGAATTTGAGCTGCTTTTATATCTGGCCAAGCATCCCAACCGGGTATTCGGCAGAGACGAATTATTCGAAAAGGT
CTGGGGACTTGAGGCGCTCGGTGATTCCGCTACGGTCACGGTTCATATCGCCCGGCTGCGCGATAAAATTGAAAGCGACC
CTTCCAACCCGCAATATATCGAAACGGTTTGGGGAGCGGGCTATCGGTTCAGGGTTTAA

Protein sequence : 
MKKILIIEDDLNIAELQQDYLEVEGFAADICADGSAGLKQFQENGYDLLILDIMLPGLDGLEILRSLRDEKEVPVILVSA
KKEEIDKIKGFNLGADDYITKPFSPGELVARVKAHLQNYEKLKKKFSEKQIRNNAVVIRGLRIEKEARRVYIHDKEANLA
QKEFELLLYLAKHPNRVFGRDELFEKVWGLEALGDSATVTVHIARLRDKIESDPSNPQYIETVWGAGYRFRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-40 43
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein AF155139.2.orf0.gene Protein 2e-44 45
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein AM180355.1.gene1830. Protein 2e-45 44
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein HE999704.1.gene2815. Protein 2e-43 44
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_005054.2598277.p0 Protein 2e-41 43
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_014475.1.orf0.gen Protein 2e-41 43
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_012469.1.7685629. Protein 8e-41 43
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein AE016830.1.gene1681. Protein 3e-46 43
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_002952.2859905.p0 Protein 2e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_002951.3237708.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_002758.1121668.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_009641.5332272.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_013450.8614421.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_007793.3914279.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_003923.1003749.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_007622.3794472.p0 Protein 2e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_002745.1124361.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_009782.5559369.p0 Protein 3e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein NC_012469.1.7686381. Protein 7e-42 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein EU250284.1.orf4.gene Protein 2e-43 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein AF130997.1.orf0.gene Protein 4e-40 42
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein DQ212986.1.gene4.p01 Protein 2e-39 41
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein FJ349556.1.orf0.gene Protein 5e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein VFG1563 Protein 2e-40 43
DCF50_p1862 YP_006913849.1 transcriptional regulatory protein VFG1702 Protein 8e-40 42