Gene Information

Name : DCF50_p1701 (DCF50_p1701)
Accession : YP_006913688.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : Transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1733443 - 1734243 bp
Length : 801 bp
Strand : -
Note : -

DNA sequence :
ATGTGTCAGGCCTTAAACGTATCAAGGAGCGGTTATTACGCTTTTCTAAAAAGACCGCCCAGCGCCAGAGCCGAAAGAAA
AGCTGCGCTGCTGAAAACCGTTACAAGCCTCTTTTACAAATACAAGCGCATCTATGGTGCGACCAGAATAACCAAAGAGC
TGCCTCAAGAGCAATTGGCCTGCAAGACAACAGTTGCCAAAGTGATGCGGGAGAACGGCCTTCGTTCAAAGGTGATTAAG
AAATACAAAGCAACCACAAACTCACGTCACAACTTGCCAGTTGCTGAAAATATACTTAACCGTGAGTTCACTGCATCCCG
TCGCAATGAAAAATGGGTTTCAGACATCACGTACATTGCTACGGATGAGGGCTGGCTCTATCTGGCAGGGATTCTGGATC
TTTACGACCGTTCAATTGTCGGTTGGTCAATGGATAGCCGTATGAAAACGTCACTCGTGATATCGGCTCTAAGGAATGCC
ATCGGTCGCAAAAAACCTAAAGAAGGTCTCATTTTACATTCAGATCGTGGTGTACAGTATGCCAGTCATAACTACCAGAA
ACTAATCCAGGAAAAGAACTTTGTTTGCAGCATGAGCCGCAAAGGCAACTGTTATGACAATGCCCCAATGGAATCATTCT
GGGGTAAGTTGAAAACAGAATGGCTTAATGACATGCATTTCAAGACCAGAGATGAAGCAAGATCAGCAGTATTTGAGTAC
ATTGAGCTCTTTTACAATCGCAATCGCATTCATTCTTCCAACGATTACATAGCGCCATTAAAGGTGCATGATGCAGCATG
A

Protein sequence :
MCQALNVSRSGYYAFLKRPPSARAERKAALLKTVTSLFYKYKRIYGATRITKELPQEQLACKTTVAKVMRENGLRSKVIK
KYKATTNSRHNLPVAENILNREFTASRRNEKWVSDITYIATDEGWLYLAGILDLYDRSIVGWSMDSRMKTSLVISALRNA
IGRKKPKEGLILHSDRGVQYASHNYQKLIQEKNFVCSMSRKGNCYDNAPMESFWGKLKTEWLNDMHFKTRDEARSAVFEY
IELFYNRNRIHSSNDYIAPLKVHDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 2e-53 48
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 2e-53 48
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-53 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 7e-53 47
unnamed AAF09030.1 unknown Not tested SHI-O Protein 6e-53 47
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 6e-53 47
unnamed AAF09022.1 unknown Not tested SHI-O Protein 3e-53 47
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 9e-53 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 6e-53 47
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-47 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-44 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-44 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-44 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 8e-42 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-42 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 8e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p1701 YP_006913688.1 Transposase VFG1706 Protein 3e-53 47
DCF50_p1701 YP_006913688.1 Transposase VFG1631 Protein 9e-48 44