Gene Information

Name : DCF50_p1410 (DCF50_p1410)
Accession : YP_006913401.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : Type I restriction-modification system, specificity subunit S
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.21.3
Position : 1443303 - 1444514 bp
Length : 1212 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTTGATGAGCAAAATGAACTTACTTTAGCACAAGCCATTGAATCAGCAAATACGGGATTGGATGCGATAAAAAG
AGCCCCAATAGTTTCTTATAATAGTGGAACAAGGTGTTTAAGAATACAAGATATTTCTCAAAGTAAAGAATTTGAAAATT
GGGGATTTTGTGAAGTTGAAACAAAAAACTATGATAAATTTTGTTTGAAAAAGGGAGATATTATGGTTGCACGTACTGGA
GCAACTATAGGAGTTAATTTTTTAATAAGAGAAAACTTAAAAGCTGTTTATAATAATGGACTAATTAGATTAAGAATAAA
CAATCAAGTAGCTGACTATACCTACATTTACTATAATTTAAGATGCAATAATTATTGGGGACATATAGAAGCAATTTCTG
GGGGAACATCAACCCAACCTAATATGAGGATAAATGCACTTTTAGATTATAAGATACTTGTACCACCCATTCCTCAACAA
AAAGCCATAGCCTCAATACTTTCTGCACTTGACGAAAAAATAGAACTCAACAACCGCATCAATAAAAACCTCGAAGAAAT
GGCACAGGCTATTTTTAAAAGCTGGTTTGTAGATTTTGAGCCGTTTCAAGATGGTGAGTTTGAGGATAGCGAGCTGGGGA
GGATACCAAAGGGCTGGAGAGTTGGTTATTTGGGTGAGATAATCGAATTATATGATTCAAAAAGAATACCCCTTTCAAGC
AGACAACGTGAAGGTTTAGACAAAAAATACCCGTATTATGGAGCTACATCAATCATGGATTATGTAGATAAATATATTTT
TGATGGAATATACTTACTTTTAGGTGAAGATGGGTCAGTAATTGATGAAAATGAATATCCATTTTTGCAATATGTTTGGG
GAAAGTTTTGGGTCAACAACCATGCACATGTTATAAAAGGCAAGAACGGTTTTTCAGAGGAGTATTTGTTTACTCTTTTA
AAAAAAACAAATGTAAGAAGCATAATAACAGGAGCAGTTCAGTTGAAAATTAATCAAGGCAATCTGTGTAATCTAAGAGT
TTTGATACCTGAAAGTAATGTAGTAGAGAAAGTTAACCTTATTCTAAAAGATATATTTACTATGTATAGAAAAAATATTG
AAGAAAGCCGCAGTTTAATTGAAACACGCGATTCTTTACTCCCAAAACTTATGAGCGGTGAAATACGAGTCCCAGTACAG
GGGGTAAGCTGA

Protein sequence :
MSFDEQNELTLAQAIESANTGLDAIKRAPIVSYNSGTRCLRIQDISQSKEFENWGFCEVETKNYDKFCLKKGDIMVARTG
ATIGVNFLIRENLKAVYNNGLIRLRINNQVADYTYIYYNLRCNNYWGHIEAISGGTSTQPNMRINALLDYKILVPPIPQQ
KAIASILSALDEKIELNNRINKNLEEMAQAIFKSWFVDFEPFQDGEFEDSELGRIPKGWRVGYLGEIIELYDSKRIPLSS
RQREGLDKKYPYYGATSIMDYVDKYIFDGIYLLLGEDGSVIDENEYPFLQYVWGKFWVNNHAHVIKGKNGFSEEYLFTLL
KKTNVRSIITGAVQLKINQGNLCNLRVLIPESNVVEKVNLILKDIFTMYRKNIEESRSLIETRDSLLPKLMSGEIRVPVQ
GVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdS YP_251978.1 hypothetical protein Not tested SCCmec Protein 1e-57 47