Gene Information

Name : DCF50_p1382 (DCF50_p1382)
Accession : YP_006913373.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : putative site-specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1415789 - 1417456 bp
Length : 1668 bp
Strand : -
Note : -

DNA sequence :
ATGGCAAATGCAGTAAAGACGGTTCAAGTATTACAGCCGATTCAGAGACAGGACAATCCTGAAGATTCATTAAATATGAG
CAAAAGAAAAGTTTGTGCTTATTGTAGAGTCAGCACTGATTCCGATGAGCAAATGGAGAGCTATAATGCTCAGGTAAGCG
AATATAAGAAAAAGATTACAGAGAATCCTGAATGGGAGTTTGTTGACATATATGCGGATGCTGGCATAAGCGGTACGAAC
GTTAAACACAGACTTGCCTTCAATAGAATGATTAGAGATTGTGAAAATGGCAAGGTAGACCTTGTTATCACAAAGTCCAT
TTCAAGATTTGCAAGAAATACTGTAGATTGTTTGAAGCATGTAAGAGAATTGAAAAACATCGGGGTTGAGGTATTCTTTG
AAAAGGAGAATATATACTCCTTTGATTCCAAGATGGAATTGGTTCTGACTATGCTTAGTTCAATAGCTCAAGAGGAAAGT
CGTAATATTTCTGAAAACACAAAGTGGGGACTTAGAAAACGCTTTAGGGATGGGGTTACGGTATGCAATACTGAGAGGTT
TCTCGGCTACGATAAAGATGAGAGTGGCAACCTTATAATCAATGAGGAGCAAGCCACGATTGTAAGAAGGATTTTTAGGG
AATACCTTGATGGCAAAGGATATGCAGCCATTGGAAGAGGACTTGAAGTAGATGGAATAATAACTGTAGCAGGAAAAACA
AAATGGTGGGATTCCAGTATTAGGGGCATCCTTGAAAATGAGAAATATTATGGGGAACTTCTACTGCAAAAGACGGTGAC
AGTTGATTACCTGACCAAGAAGAGAGTTGACAATGATAACATAGAGCCGATGTACAGAATTGATAATAACCACGAGCCAA
TAATATCAAAGGAAATGTTTGACCTTGTACAGCAGGAGCGAAAAAGACGCTTTGAAATAACAAGGGGCAGAGATGAGGAT
AGAAGAAAATATTCCAATAAATATGGCTTCAGTGGAAAGCTTTACTGTGAAAAATGCGGAAAGACCTTAAAACGCAGACA
CTGGAATGTCGGCACAAAATCTGAAAAAATAGTATGGCAGTGCAATAGTTATATTCAAGGAGTAAAGAACTGCTCTGCAA
AAGCGGTTGACGATGCAACATTAAAAAGAGCCTTTATCCAACTGTACAATGATATGGTTGTTGATAAAGGCTCTTTCTTT
AAGGTTTTCCTAGATAATATCAACAAGGTAATGACCAAAGAATCAAAGGTTTCAGAAATTAATAAAGTCACAGAAAGCAT
GGGGCTACTGGAACAGGATTTAAGCGAATTGGTACAGCTGAAGCTGCGTAAGCAAATTGACGATAAATATTTCAACAAGG
AATATGAAAGAATAACCAATGAACTTGAAAAGGTTAGTATTAAAAAAGATAACCTTGAAAGGCAACATCTTGATGATGTT
AAATATAAGGAGAAGCTGGCTGCGATAAGCAAGATAGTTGATAATGGCGATGAGCCTTTGGTAGAATTTGATGATGACTT
CTTTATAGCTTTGGTGGATAAGGTTATAATAAAATCACCGAACCATTTCATGTTTATTCTTGAAAGTGGGCAGGAATATG
AAGCAGATTATAGCAGTCAACAGCAGACCACCCACGTTGAAACGATAACTCGGATAAATCGTGCTTAA

Protein sequence :
MANAVKTVQVLQPIQRQDNPEDSLNMSKRKVCAYCRVSTDSDEQMESYNAQVSEYKKKITENPEWEFVDIYADAGISGTN
VKHRLAFNRMIRDCENGKVDLVITKSISRFARNTVDCLKHVRELKNIGVEVFFEKENIYSFDSKMELVLTMLSSIAQEES
RNISENTKWGLRKRFRDGVTVCNTERFLGYDKDESGNLIINEEQATIVRRIFREYLDGKGYAAIGRGLEVDGIITVAGKT
KWWDSSIRGILENEKYYGELLLQKTVTVDYLTKKRVDNDNIEPMYRIDNNHEPIISKEMFDLVQQERKRRFEITRGRDED
RRKYSNKYGFSGKLYCEKCGKTLKRRHWNVGTKSEKIVWQCNSYIQGVKNCSAKAVDDATLKRAFIQLYNDMVVDKGSFF
KVFLDNINKVMTKESKVSEINKVTESMGLLEQDLSELVQLKLRKQIDDKYFNKEYERITNELEKVSIKKDNLERQHLDDV
KYKEKLAAISKIVDNGDEPLVEFDDDFFIALVDKVIIKSPNHFMFILESGQEYEADYSSQQQTTHVETITRINRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smi_1713 YP_003446815.1 site-specific recombinase Not tested The aminoglycoside resistance gene cluster Protein 3e-100 43
SSU05_0953 YP_001198319.1 DNA recombinase Not tested 89K Protein 1e-95 41
SSU98_0960 YP_001200518.1 DNA recombinase Not tested 89K Protein 1e-95 41