Gene Information

Name : DCF50_p1235 (DCF50_p1235)
Accession : YP_006913226.1
Strain : Dehalobacter sp. CF
Genome accession: NC_018867
Putative virulence/resistance : Unknown
Product : Transposase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1286570 - 1286854 bp
Length : 285 bp
Strand : +
Note : -

DNA sequence : 
ATGACCAAAAGAGAACGAAGATCTTTTACCGATGAATTCAAGAATCAAATGGTTCAGTTATATCTGAACGGCAAACCGAG
AGCCGAAATTCTGAAGGAATATGATATAGGTGGTTCAACCTTTGACAGATGGACGAAACACCATGAGAAAACAGGTTCAT
TTCGTGAAAAAGATAATCTTAGTGATGAACAGAAAGAACTCATAAAACTTCGCAAAGAAAACCAGCGCTTGTTGATGGAA
AATGATATTTTAAAGCAAGCCGCGCTGATCATGGGACGAAAGTAG

Protein sequence : 
MTKRERRSFTDEFKNQMVQLYLNGKPRAEILKEYDIGGSTFDRWTKHHEKTGSFREKDNLSDEQKELIKLRKENQRLLME
NDILKQAALIMGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0081 YP_039548.1 transposase Not tested Type-II SCCmec Protein 2e-25 66
unnamed BAC67553.1 hypothetical protein Not tested Type-IVc SCCmec Protein 1e-25 66
SAR0416 YP_039869.1 transposase Not tested vSa¥á Protein 4e-22 60
SACOL0464 YP_185354.1 IS3 family transposase Not tested vSa¥á Protein 2e-18 54
tnp YP_001331418.1 transposase Not tested vSa¥á Protein 2e-18 54
SAV0418 NP_370942.1 transposase Not tested vSa¥á Protein 1e-18 52
SA0379 NP_373628.1 transposase Not tested vSa¥á Protein 1e-18 52
l7045 CAD33744.1 - Not tested PAI I 536 Protein 8e-08 41
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 8e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DCF50_p1235 YP_006913226.1 Transposase-like protein VFG1485 Protein 3e-08 41