Gene Information

Name : DHBDCA_p787 (DHBDCA_p787)
Accession : YP_006909801.1
Strain : Dehalobacter sp. DCA
Genome accession: NC_018866
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 826777 - 827454 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGACGATACTTGAAACAACAAAATTAAAAAAATATTACGGCAGCGAGGATACAACGGTTAAAGCGTTAGACGGCATCGA
CCTCACCGTGGAGAGTGGGGAGTTTGTAGCCATCGTAGGCACATCCGGCAGCGGCAAGTCTACGCTTCTACATATGCTGG
GTGGGCTTGACCGTCCCACAAGCGGCACGGTCACTGTCGATGGAAAGGAGATATTTGCACTGAAAGACGAAGAACTGACG
ATTTTCCGCCGAAGAAAAATTGGCTTTGTCTTTCAAAATTATAATCTTGTTCCTGTATTGAATGTGTACGAGAATACTGT
CCTGCCTATTCAGCTCGACGGGAACGAGCCGGATAAACGCTATGTGGACAGAATTATCGGCACATTGGGGCTTGAAAGCA
AACTGAACAATCTGCCCAACAATCTTTCCGGCGGTCAGCAGCAGCGGGTGGCGATTGCCAGAGCTTTAGCCGCTAAGCCT
GCTATCGTTCTCGCGGATGAGCCGACAGGAAACCTCGACAGTAAAACCAGCCAAGATGTCCTGGGACTGCTCAAGGTTAC
AAGCGAAAGGTTCAGTCAGACCATTGTTATGATTACCCACAACGAGGAAATTGCCCAGTTGGCAGACCGCATCATCCGAA
TTGAAGATGGAAAAATCGTGGGTGGTGGAAGCAAATGA

Protein sequence : 
MTILETTKLKKYYGSEDTTVKALDGIDLTVESGEFVAIVGTSGSGKSTLLHMLGGLDRPTSGTVTVDGKEIFALKDEELT
IFRRRKIGFVFQNYNLVPVLNVYENTVLPIQLDGNEPDKRYVDRIIGTLGLESKLNNLPNNLSGGQQQRVAIARALAAKP
AIVLADEPTGNLDSKTSQDVLGLLKVTSERFSQTIVMITHNEEIAQLADRIIRIEDGKIVGGGSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 47
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-20 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DHBDCA_p787 YP_006909801.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 4e-70 73
DHBDCA_p787 YP_006909801.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 8e-54 58
DHBDCA_p787 YP_006909801.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-30 45
DHBDCA_p787 YP_006909801.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-30 44
DHBDCA_p787 YP_006909801.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 4e-28 42