Gene Information

Name : DHBDCA_p296 (DHBDCA_p296)
Accession : YP_006909309.1
Strain : Dehalobacter sp. DCA
Genome accession: NC_018866
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 301063 - 302532 bp
Length : 1470 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATCTGGATATCAATGAACTGATGCGTATTCGCTTGGATAAGCTGGACAATCTCAGGGCGAAAGGTATTGAACC
CTATGCAGACCATTACTTGAGAACCCATTTATCACAGGGCATTATCGAGAATTTTGATGAACTGGAAGGGCAGGATGTCA
GCGCAGCCGGAAGAATCATGTCCAAAAGAGATCAAGGGAAAGTTCTTTTCGTGCACATTCAAGACCTTCAGGGGAAAATC
CAGATCTATATTCGGGTTGATGCGTTCGGCGAAGAAATGTTTGACACGATAAAGACGTTTGATATTGGTGATATTATCGG
CGTCCGCGGCAGCGTTTTCCGTACCAAAAGAGGCGAGATTTCAATAAAGGCTGAGGATATTACATTGCTATCAAAATCGC
TGAGACCGCTGCCGGAAAAGTTTCATGGGCTTACCAACGTCGATATCCGTTACCGTCAGCGTTATCTTGATTTGATCATG
AATGCAGAAGTGAAGGAAACATTTATCACCAGAAATAAAATTATCAGAACGATGCGTGAATACCTGGAAGAGAAAGGATT
TCTGGAGGTTGAGACGCCTACGCTGCTTCCGATAGCAGGCGGCGCGACTGCAAAGCCTTTTATTACGCATCATAACGCGC
TTGATATGCAGTTATACATGAGGATAGCTCTGGAACTTCCGCTTAAGAGGCTGATTGTGGGCGGTTTTGAAAAGGTATTC
GAAATTGGCCGTAATTTCCGGAATGAAGGAATTTCGATTAAGCATAACCCTGAATTTACCATGATGGAACTATATCAGGC
TTATGCAAATTATGAAGATATTATGAACCTTACAGAGGATATGATCGTTTATATTGTGGAGAAAGTTCTTCATACCCAGG
AAGTTACTTATCAGGGTGAGAAGATTAATTTCGCGAAGCCCTGGCGCCGCTTGCCGATGCTTGACGCAATTAAAGAGTAT
GCTGGAATAGATTTTGCCCAAATTGAAACCGAGGAAGAAGCCAGAAAAGTTGCCATGGAGAAAGGGCTGCAAATTAATGC
CCAGGAAACCAAGGGCAAAATTATCAATGAGGTTTTTGAAGAATTTGTTGAACCAAAACTTATTCAACCAACTTTTATCA
TCGGTCATCCTGTAGAAATTTCTCCTCTCGCTAAAAGGAATGCAGAAAATCCTGAGTATACGGACAGGTTTGAGGTATTT
ATTTATGGTAGAGAGGCAGGAAATGCGTTCTCGGAGTTAAATGACCCCATTGATCAGAGAGGGAGATTTGAAAAACAGGT
TCTGGAAAGAGAAAAGGGTGACGATGAGGCGCACATGATGGATGAAGACTTTCTTCAAGCGCTTGAATATGGACTTCCGC
CTACAGGCGGACTTGGCATTGGGATTGACAGGCTCGTCATGCTTCTGACAGATTCAGCCTCTATCAGGGACGTTATCTTA
TTTCCTACCATGAAATCCAGAGAAGATTAA

Protein sequence :
MENLDINELMRIRLDKLDNLRAKGIEPYADHYLRTHLSQGIIENFDELEGQDVSAAGRIMSKRDQGKVLFVHIQDLQGKI
QIYIRVDAFGEEMFDTIKTFDIGDIIGVRGSVFRTKRGEISIKAEDITLLSKSLRPLPEKFHGLTNVDIRYRQRYLDLIM
NAEVKETFITRNKIIRTMREYLEEKGFLEVETPTLLPIAGGATAKPFITHHNALDMQLYMRIALELPLKRLIVGGFEKVF
EIGRNFRNEGISIKHNPEFTMMELYQAYANYEDIMNLTEDMIVYIVEKVLHTQEVTYQGEKINFAKPWRRLPMLDAIKEY
AGIDFAQIETEEEARKVAMEKGLQINAQETKGKIINEVFEEFVEPKLIQPTFIIGHPVEISPLAKRNAENPEYTDRFEVF
IYGREAGNAFSELNDPIDQRGRFEKQVLEREKGDDEAHMMDEDFLQALEYGLPPTGGLGIGIDRLVMLLTDSASIRDVIL
FPTMKSRED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-112 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DHBDCA_p296 YP_006909309.1 Lysyl-tRNA synthetase (class II) VFG1668 Protein 8e-113 52