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Name : DHBDCA_p2033 (DHBDCA_p2033) Accession : YP_006911045.1 Strain : Dehalobacter sp. DCA Genome accession: NC_018866 Putative virulence/resistance : Virulence Product : Type IV fimbrial assembly, ATPase PilB Function : - COG functional category : - COG ID : - EC number : - Position : 2066586 - 2068265 bp Length : 1680 bp Strand : + Note : - DNA sequence : ATGCCGGAAACGATGCGGAAATTGGGACAGCTTTTAGTTGAATCAGAGGTGATTACTACTAAGCAGCTCGAAGATGCCTT GGAGATGCAGTCCAAAACCTCTAAAAAACTGGGCGAGATCCTGATTGAAATGAAATCCATTACAGAAAAACAGCTACTCA GAGTACTGGAATTTCAATATCATATTCCATACTATGATCTAGGTGAAACTCCGATTGATCCTCTTGCTACGGGACTGATT ACAGAAGGAATGGTCAGAAAGCATTCCTTGATACCGATCAAGAAGGAAAATAATGTGCTGATCGTTGCCATGGTCGACCC GCTGGACTTTTATGCGATCGATGATGTCAAACGGGCCACCCGTCTTGACATTAAGCCTGCCATGGCTACCGCGTCGGATA TCATGAATGCGATCGAGCGCTATTATGGCAAGGAAAGCGCTGAAAAAGCGATTGAAGAACTGAAACAAACGTATGACCTT GTTGACTTTTCGGGAATTGACGATCAGTTTGGCGATGAGGTGACGAATGCCCCTGTCGTAAGACTGGTTAATTCCGTGAT TCAGCACGCGATCAAGACCAATGCCAGTGACATTCATATTGAACCGTCTGACAATGAAATGCGGATCCGCTACCGGATAG ACGGAGAACTTCAGGAAGCCATGAAAACATCTAAAGCGGCTCACCAGGCCATCGTCACCAGAATTAAGATCATGGGGCAA ATGGATATTGCTGAGAAGCGCCTGCCCCAGGATGGCAGAATCGAAGTCAGCATTGACGGCAATAACGTCGACCTCAGGCT TTCCATACTTCCGACTGTCCACGGAGAAAAGATTGTTATCCGCGTGCTTGGAATGAGAAACAGTACATATACCAAATCTG AGCTGGGCTTTACTGCTGAAAATCTTGAGCTGTTTGACCGGATTATTAAAAGTCCGAATGGGATCATCCTTGTTTCCGGC CCCACCGGTTCCGGAAAAACGACGACACTTTACGCAGTCATGCGGGAATTGAATAAACCAACTGCCAATATCATCACCGT AGAAGACCCTGTTGAATACCGGATGGATGGGATTAATCAGGTTCAAGTCAATACCAAAGCCGGCCTGACTTTTGCCTCAG GACTGCGGTCGATTTTGCGTCAGGACCCCGACATTATCATGATTGGGGAGATCCGTGATTCGGAGACAGCCCAGATTGCG ATCCGTTCAGCCATCACCGGCCACCTGGTCTTAAGCACTATCCACACCAACGACGCAGCTTCCTCGATCCTCCGGCTTGT CGATATGGGAATTGAATCTTATCTTGTTTCTTCCGCTGTTGTCGGCCTGATGGCACAGAGACTTGTCCGTAAAATATGCA CGAAATGCAAAACTTCATACCGACCGGAACATGCGGAAATGATGCTGCTGAAACTGCGAGAACCCCAGCCGCTATACAAA GGGACTGGATGTCCTGCCTGTAATTACACAGGCTATCACGGCAGAACTGCCATCCATGAAATCATTCCGATCAACAAGGA TATCCGCGAGATGGTTAACCGGGGTGTAACTCCTGATCAAATAAGACATATTGCCGGCCGCTTTGGCTATATTTCGCTTC GTGATACCTGTACCCGTCTGGTTCTGGACGGAACCACCACCACGGAAGAATTATTAAAAGTAACCTATAGTATTGAATAG Protein sequence : MPETMRKLGQLLVESEVITTKQLEDALEMQSKTSKKLGEILIEMKSITEKQLLRVLEFQYHIPYYDLGETPIDPLATGLI TEGMVRKHSLIPIKKENNVLIVAMVDPLDFYAIDDVKRATRLDIKPAMATASDIMNAIERYYGKESAEKAIEELKQTYDL VDFSGIDDQFGDEVTNAPVVRLVNSVIQHAIKTNASDIHIEPSDNEMRIRYRIDGELQEAMKTSKAAHQAIVTRIKIMGQ MDIAEKRLPQDGRIEVSIDGNNVDLRLSILPTVHGEKIVIRVLGMRNSTYTKSELGFTAENLELFDRIIKSPNGIILVSG PTGSGKTTTLYAVMRELNKPTANIITVEDPVEYRMDGINQVQVNTKAGLTFASGLRSILRQDPDIIMIGEIRDSETAQIA IRSAITGHLVLSTIHTNDAASSILRLVDMGIESYLVSSAVVGLMAQRLVRKICTKCKTSYRPEHAEMMLLKLREPQPLYK GTGCPACNYTGYHGRTAIHEIIPINKDIREMVNRGVTPDQIRHIAGRFGYISLRDTCTRLVLDGTTTTEELLKVTYSIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-93 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DHBDCA_p2033 | YP_006911045.1 | Type IV fimbrial assembly, ATPase PilB | VFG1876 | Protein | 5e-90 | 45 |
| DHBDCA_p2033 | YP_006911045.1 | Type IV fimbrial assembly, ATPase PilB | VFG0182 | Protein | 4e-95 | 43 |
| DHBDCA_p2033 | YP_006911045.1 | Type IV fimbrial assembly, ATPase PilB | VFG2048 | Protein | 2e-94 | 41 |
