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Name : ltrA (DHBDCA_p1190) Accession : YP_006910204.1 Strain : Dehalobacter sp. DCA Genome accession: NC_018866 Putative virulence/resistance : Unknown Product : Retron-type reverse transcriptase Function : - COG functional category : - COG ID : - EC number : - Position : 1230657 - 1232468 bp Length : 1812 bp Strand : - Note : - DNA sequence : ATGGCTACCACTACAGCGAATACCAAGTTGCGCCACAATGAATATTATGGGCAACAAAGTATACTTGATGAATTGTATGA AAGAAGTCTCAAGGGTGCAAAGTTTAATAAACTATACGAAAAAATTGTAGAAGAAAACAACATCCTATTAGCCTATCGAA ACATTAAGGCTAACACAGGGAGTAAAACAGAAGGCACTGACGGTTTAACCATCAAAGACATAGCAGGTATGACCAACCAA GAAGTCATTACAATGGTCAAAAGAAGGTTGAAGAACTTTACACCACAATCGGTCAGACGGGTAGAAATCTTAAAAGATAA TGGCCAAAATCGCCCTCTTGGAATACCCACTATGTCCGATCGTCTGATTCAAGCGTGTATTTATCAAATCCTTGAGCCAA TCTGTGAAGCAAGGTTTCACAATCATAGCTATGGATTTAGGCCCACTAGAAGGACAGAGCATGCACTAGCCACGATGCAC AGGATGATTAACATTCAGCACCTGCATTTTGTTGTAGATGTGGATATAAAGGGATTTTTCGATAATGTCGATCATGGAAA GCTTCTTAAACAGATGTGGACTATGGGGATTCAGGACAAGAACCTTCTTTGTATTATATCGGCTATGTTAAAGGCAGAAA TTGAAGGAATAGGAATCCCCAATAAGGGTGTTCCGCAGGGTGGTCTGTGTTCTCCATTATTTTCTAACGTGGTCCTTAAT GAATTAGATTGGTGGATCAGCGATCAATGGGAAAGCTATGAAACTTCATACCCCTATAAAAGAAACGAAGGCAAAATTAG AGCAATACGCAGAGGGTCAAAACTGAAGGAATGCTATATCATCAGGTACTGTGATGATTTCAAAATCATGTGTCCAACCA GAGATGTAGCAGAACGGATGTTTGTCGCAGTTAAACTCTGGCTCAAAGAGAGACTAAATCTAGAAATAAGTTCAGAAAAA TCAAAGATTACAAACCTGCGCAAGAAATCATCGGAGTTCCTCGGCTTCAAAATCAAAGCTGTTGTTAAGGGAAGGAAACG AGTCGCTAACTCAAATATCAAACCCAGTGCTGTTGTGAAAATAATAGCTAAAGGGAAGGATCTTATCAAGAAAATCCAAA AGAATTCAGCAGACAAGAATGTAAGTCTCTACAATTCTTATGTTCTTGGAACTCAAAATTACTATCGTATAGCAACACAT TGTACTAAAGACTTCTCAAAAATCGGATATGAGCTTGATAGGAACATTAAAATCAGGTGGAAGTCAATCTCTACCAATAA GGGTTCTCCCAGCAAGCTATACTTGGAAAGGTATAAGGGATATGCTAAGAAGAAGACATATATACATGGTCACATCATAT TCCCCATGTCAGCATGTAAAACTAAAAATGCAATGAATCACTCCAAAATGGTAAACAAATTCACACCTGAAGGGAGAAAA TTCATTCATCAACTAATCGAAAGTGTATCAGGTTTCGAATTCATATACCTAAGCAAAAATCCAGTAATAGACCGAAGTAT TGAGTATAATGACAACCGAATATCCTTATTTTCTGCCCAAGGCGGAATGTGTGAGGTACTCGGTAAAAGATTAGAAGTAA ATGATTTCCATTGCCATCGTATCATTCCAATTATTGCTGGCGGAGGAGATAAATACAGTAATCTTGTCATAATTGCTCCT GATATTCACAGATTGATACATGCAACCAAATCCGAAACAATTCAACAAATACTGGCGAAGCTTGAACTATCTAAAAAGCA GATAGCCAAAGTGAATAAATTCAGAGTACAAGTAGGAAATATTGTGATATAA Protein sequence : MATTTANTKLRHNEYYGQQSILDELYERSLKGAKFNKLYEKIVEENNILLAYRNIKANTGSKTEGTDGLTIKDIAGMTNQ EVITMVKRRLKNFTPQSVRRVEILKDNGQNRPLGIPTMSDRLIQACIYQILEPICEARFHNHSYGFRPTRRTEHALATMH RMINIQHLHFVVDVDIKGFFDNVDHGKLLKQMWTMGIQDKNLLCIISAMLKAEIEGIGIPNKGVPQGGLCSPLFSNVVLN ELDWWISDQWESYETSYPYKRNEGKIRAIRRGSKLKECYIIRYCDDFKIMCPTRDVAERMFVAVKLWLKERLNLEISSEK SKITNLRKKSSEFLGFKIKAVVKGRKRVANSNIKPSAVVKIIAKGKDLIKKIQKNSADKNVSLYNSYVLGTQNYYRIATH CTKDFSKIGYELDRNIKIRWKSISTNKGSPSKLYLERYKGYAKKKTYIHGHIIFPMSACKTKNAMNHSKMVNKFTPEGRK FIHQLIESVSGFEFIYLSKNPVIDRSIEYNDNRISLFSAQGGMCEVLGKRLEVNDFHCHRIIPIIAGGGDKYSNLVIIAP DIHRLIHATKSETIQQILAKLELSKKQIAKVNKFRVQVGNIVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 4e-123 | 45 |
