Gene Information

Name : trwI (BN117_p09)
Accession : YP_006909007.1
Strain :
Genome accession: NC_018830
Putative virulence/resistance : Virulence
Product : trwi protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6021 - 7046 bp
Length : 1026 bp
Strand : +
Note : VirB6 family, plasmid conjugal transfer protein

DNA sequence :
ATGAGTTTCCAGTTGCTGGGATCGATATTTAGCCAAATAGACACAGTTACTCAAACCTTCATCACCGATATTTCGTCGAA
GGCTATTGCGGAGATTACACCCGTTGTCTCGGTCGGCCTGACGCTCGGCTTCATCACGTATGGCTGGCTCATCATTCGCG
GCGCGGTGGAAATGCCGGTGGCGGAATTTCTGAACCGCTGCCTGCGGGTCGGCATCATCGTGTCGATTGCCCTGGCGGGC
GGGCTTTACCAATCGGAAATTGCCGATGCGATTGTATCGGCCCCGGATGCTTTAGCGACAGCGTTGATCAGTGATCCCAC
ACAGGGCAGCTCGGCGGCTCAGCTTGTCGATCAGGCGGCGGAAAAGGGATTTAATTATGCAGGCCAAGCATTCGACAAAG
CCGGAATTTTTTCAGTCCAGGGTATCGCCTATGTCGGTATATGGGCGGTCATCATGGTCGCAACGATAGCTCTAACCGCA
ATTGGCGGTGCCTTCATTCTGCTGGCGAAGATTGCCCTTGCCCTACTGGCGGGCCTCGGCCCGTTGTTCATCATCGCCCT
GCTGTGGCAACCGACGCATCGGTTCTTTGAACTGTGGGCCGGACAGGTTCTAAATTACGGTCTTCTAATCATTATCTTTT
CCGCTGTTTTTGGTCTCATGATGGACCTTTACGGCGGCTATATGGATGGAGCCAAACTCGACGGTGTCCAGAACGCTTCT
TGGACTGTCGGAGGAGCGGGAATTATCTCCGCTGCGTGCCTGGTCATCCTGCTCCAACTGCCGAGTATCGCAAGCGGCTT
GGCCGGCGGCGTCGGTCTTGGCTACATGTGGGAGCTGCGCGCCATTCGTGGCGGTGCGGGATCGGCCTATCGTGGCGGCC
GTACCGCTGCGCGAGCTGCTAGGGCTGCGCCTGGCGCTGCCCGTAGCGCGGCCGTTGGCGCGACCAACATGGCAAAGACG
GCTGCTGGTGGCGCTGCTGGCGTTGCCCGAGCTGCTGCCGGGTACTTCCGCGGCCGCAAAACATGA

Protein sequence :
MSFQLLGSIFSQIDTVTQTFITDISSKAIAEITPVVSVGLTLGFITYGWLIIRGAVEMPVAEFLNRCLRVGIIVSIALAG
GLYQSEIADAIVSAPDALATALISDPTQGSSAAQLVDQAAEKGFNYAGQAFDKAGIFSVQGIAYVGIWAVIMVATIALTA
IGGAFILLAKIALALLAGLGPLFIIALLWQPTHRFFELWAGQVLNYGLLIIIFSAVFGLMMDLYGGYMDGAKLDGVQNAS
WTVGGAGIISAACLVILLQLPSIASGLAGGVGLGYMWELRAIRGGAGSAYRGGRTAARAARAAPGAARSAAVGATNMAKT
AAGGAAGVARAAAGYFRGRKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trwI1 CAD42846.1 TrwI1 protein Not tested trw-PAI Protein 3e-52 50
trwI1 YP_001610478.1 TrwI1 protein Virulence Not named Protein 4e-52 50
trwI4 CAD42854.1 TrwI4 protein Not tested trw-PAI Protein 4e-52 49
trwI2 YP_001610481.1 TrwI2 protein Virulence Not named Protein 9e-52 49
trwI3 CAD42852.1 TrwI3 protein Not tested trw-PAI Protein 2e-52 49
trwI5 YP_001610489.1 TrwI5 protein Virulence Not named Protein 9e-52 49
trwI4 YP_001610486.1 TrwI4 protein Virulence Not named Protein 6e-52 49
trwI3 YP_001610484.1 TrwI3 protein Virulence Not named Protein 2e-52 49
trwI2 CAD42849.1 TrwI2 protein Not tested trw-PAI Protein 7e-52 49
trwI5 CAD42857.1 TrwI5 protein Not tested trw-PAI Protein 7e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
trwI YP_006909007.1 trwi protein VFG2264 Protein 4e-58 54
trwI YP_006909007.1 trwi protein VFG2261 Protein 1e-57 54